Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq3 104 1e-16 >seq3 Length=7384412 Score = 104 bits (114), Expect = 1e-16 Identities = 120/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| || ||| || ||||||||| |||||| || | |||||||| | || |||||| Sbjct 6253825 CTCGATCAGCATCCCGATGGTCATGCGAGACGGGAAGCCGTGCGGGTTGAAGAGGATGTC 6253884 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT--- 449103 || || |||| | || |||| ||||||||||| || | ||| ||||| | | Sbjct 6253885 CGGGCTCATGCCGCTCTCGGTGAACGGCATGTCCTC--GGCCGGCCA-CAGGCGGCTCAG 6253941 Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 || ||||||||| |||||||||||| ||||||||| || Sbjct 6253942 GATGCCCTTCTGACCGTGGCGGCTGGCGAACTTGTCGCC 6253980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084174663048336