Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2908 170 3e-40 seq251 167 4e-39 seq273 161 1e-37 seq1213 147 3e-33 seq274 145 1e-32 seq475 138 2e-30 seq262 136 6e-30 seq1217 120 5e-25 seq952 102 1e-19 seq1892 87.8 3e-15 >seq2908 Length=93689 Score = 170 bits (188), Expect = 3e-40 Identities = 171/218 (78%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 85449 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACACGCACTTACTGGGAATT-C 85506 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||| ||||||| |||| | || Sbjct 85507 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCTATCACGAACGGGGTTCAGCGGGTT 85566 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||||||||| |||| | | || || || ||||||||||| |||||| Sbjct 85567 ACCCGCACCTGTCGGCGAAGGGTAGACACACGCTGGTCCGTTCAGTGTAGCGTGCGTGCA 85626 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||||||||||||||||||||||||| Sbjct 85627 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 85664 >seq251 Length=1638683 Score = 167 bits (184), Expect = 4e-39 Identities = 170/218 (78%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||| |||| || ||||||||||||| ||||| ||| |||||| |||||| | Sbjct 194110 GTACAAAGGGCATGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-C 194167 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||||| | | || ||||||||| | ||||| ||||||| |||| | || Sbjct 194168 CTCGTACATGGGAAATAATTGCAATCCCCGATCCCTATCACGAACGGGGTTCAGCGGGTT 194227 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||||||||| |||| | | || || || |||||||||||||||||| Sbjct 194228 ACCCGCACCTGTCGGCGAAGGGTAGACACACGCTGGTCCGTTCAGTGTAGCGCGCGTGCA 194287 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | |||||||||||||||||||| |||||||||| Sbjct 194288 GCCCCGGACATCTAAGGGCATCACAGATCTGTTATTGC 194325 >seq273 Length=1578729 Score = 161 bits (178), Expect = 1e-37 Identities = 180/234 (77%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| || ||||| ||||| ||| |||||| |||||| | Sbjct 275936 GTACAAAGGGCAGGGACTTAATCAATGCTAGCTT-ATGACCCGCACTTACTGGGAATT-C 275879 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| |||| ||||||| |||| | || Sbjct 275878 CTCGTTCATGGGAAATAATTGCAATCCCTGATCCTTATCACGAGCGGGGTTCAGTGGGTT 275819 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||||| ||||||| ||||| | || |||||||||||||||||| Sbjct 275818 ACCCGCACCTGTCAGCCAAGGG--TAGACACACTGGTCCGTTCAGTGTAGCGCGCGTGCA 275761 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||| | || |||||| Sbjct 275760 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCGATCTCGCGTGGC 275708 >seq1213 Length=529218 Score = 147 bits (162), Expect = 3e-33 Identities = 170/222 (77%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||| || || ||||||||||||| ||||| ||| ||||| ||||| | Sbjct 253488 GTACAAAGGGCAGGAACTTAATCAACGCGAGCTT-ATGACCCGCACTTACCGAGAATT-C 253545 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | || ||||||||| | ||||| ||||||| |||| | || Sbjct 253546 CTCGTTCGTGGAAAATAATTGCAATCCCCGATCCCTATCACGAATGGGGTTCAGCGGGTT 253605 Query 120 ACCCGGACCTGTCGGCC---AAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCG 175 ||||| |||||||||| |||| | | || || || | ||| ||||||||||||| Sbjct 253606 ACCCGCACCTGTCGGCGGCGAAGGGTAGACACACGCTGG-TCCATTCAGTGTAGCGCGCA 253664 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| |||| ||||||||||||||||||||||||||||||| Sbjct 253665 TGCAGCCCCAGACATCTAAGGGCATCACAGACCTGTTATTGC 253706 >seq274 Length=1577701 Score = 145 bits (160), Expect = 1e-32 Identities = 166/218 (76%), Gaps = 5/218 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||| ||||| ||||| || |||||| |||||| | Sbjct 1188864 GTACAAAGGGCAGGGACTTAATCAACG--AGCTT-ATGACCCGTACTTACTGGGAATT-C 1188809 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||| ||||||| |||| | || Sbjct 1188808 CTCGTTCATGGGAAATAATTGCAATCCCCGATCCCTATCACGAACGGGGTTCAGCGTGTT 1188749 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||||| ||| |||| | || || || ||||||||||||| |||| Sbjct 1188748 ACCCGCACCTGTTGGCAAAGGGTAGCCACACGCTGGTCCGTTCAGTGTAGCGCGTGTGCA 1188689 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| ||||||||||||||||||||||||||||||| Sbjct 1188688 GCCCTAGACATCTAAGGGCATCACAGACCTGTTATTGC 1188651 >seq475 Length=1163320 Score = 138 bits (152), Expect = 2e-30 Identities = 166/220 (75%), Gaps = 7/220 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||||| | Sbjct 154061 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-C 154118 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || | ||||||| | ||| | ||||| | | |||| | || Sbjct 154119 CTCGTTCATGGGAAATATTTGCAATCCCCGATCTCTATCACAAACAGGGTTCAGCGGGTT 154178 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGT--TGAATACATCAGTGTAGCGCGCGTG 177 || || |||||||||| |||| ||||| | | || |||||| ||||| |||| Sbjct 154179 ACTCGCACCTGTCGGCGAAGGG--TAGACGCATGCTGCTCCGTTCAGTGCAGCGCACGTG 154236 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | || | ||||||||||||| ||||||||||||||||| Sbjct 154237 CACCCACGGACATCTAAGGGCACCACAGACCTGTTATTGC 154276 >seq262 Length=1609165 Score = 136 bits (150), Expect = 6e-30 Identities = 166/219 (76%), Gaps = 7/219 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||||||| || ||| | ||| ||||| |||||| | Sbjct 411804 GTACAAAGGGCAGGGACTTAATCAACGCGAGTTT-ATGGCCCGCAATTACTGGGAATT-C 411861 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| | | || |||||||| | ||||| ||||||| ||| | || Sbjct 411862 CTCGTTCATGGGAAATCATTGCAATCCCCGATCCCTATCACGAACGGGGCTCAGCTGGTT 411921 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGTGC 178 ||||| ||||||| || |||| | | || || || | ||| |||||||||||| ||| Sbjct 411922 ACCCGCACCTGTCAGCAAAGGGTAGACACACGCTGG-TCCATTCAGTGTAGCGCG--TGC 411978 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||| ||||||||||||| ||||||| Sbjct 411979 AGCCCCGGACATCTAAGAGCATCACAGACCTTTTATTGC 412017 >seq1217 Length=526419 Score = 120 bits (132), Expect = 5e-25 Identities = 185/255 (73%), Gaps = 7/255 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| ||||||||||||| || ||||| | ||||| ||||| || |||||| |||||| | Sbjct 324583 GTAAAAAGGGCAGGGACCTAATCAACCCAAGCTT-ATGACCAGCACTTACTGGGAATT-C 324640 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||| | | | || ||||||||| | ||||| ||||| | | | || | || Sbjct 324641 CTCGCTCATGGGAAATAATTGCAATCCCCGATCCCTATCACAAACGAGGTACAGCGGGTT 324700 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | |||||| |||| | | | || || |||||||||||| ||||| Sbjct 324701 ACCCCCATCAGTCGGCAAAGGGTAGACATACGCTGGTCTGTTCAGTGTAGCGCACGTGCA 324760 Query 180 GCCCA-GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 |||| | ||||||||| ||||||||||| |||||||| ||||| || |||| || || Sbjct 324761 GCCCCCGGACATCTAAGAGCATCACAGACATGTTATTG-CTCAATCTCGTGTGG-CTGAA 324818 Query 239 AGGC-CATCTCCCTC 252 || | | | |||||| Sbjct 324819 AGCCACTTGTCCCTC 324833 >seq952 Length=684190 Score = 102 bits (112), Expect = 1e-19 Identities = 157/219 (72%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| ||||||| || ||||||||||||| ||||| ||| |||||| |||| ||| Sbjct 485269 GTACAAAGGTCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAA-TTC 485326 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG-ATGAAATTTCAAAGATT 119 |||||| | || ||||||||| | ||| |||||| | | || | || Sbjct 485327 CTCGTTCGTGGGAAATAATTGCAATCCCCGATCTGTATCACGAACGGGGTTCTGCGGGTT 485386 Query 120 ACCCGGACCTGTCGGCCAA-GGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||| | ||| |||||| || ||| | || | || ||| ||| | ||||| Sbjct 485387 ACCTGCACCAGTCGGCAAAGGGTAGGACACATGCTGGTCCGTTCAATGTGCCATACGTGC 485446 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||| ||||||||||||||||| ||| Sbjct 485447 AGCCCCGGACATCTAAGAGCATCACAGACCTGTTACTGC 485485 >seq1892 Length=291281 Score = 87.8 bits (96), Expect = 3e-15 Identities = 135/188 (72%), Gaps = 11/188 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| |||| || ||||||| ||| ||| Sbjct 97104 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGATCTGCACTTACTAAGAA-TTC 97047 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATT---TCAA--A 115 || ||| | | || ||||||||| | || || ||||| ||| | || | Sbjct 97046 CTTGTTCATGGGAAATAATTGCAATCCTTGATTCCTATCAC----AAACTGGGTCCAGCG 96991 Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 | | ||| | |||||||||| |||| | | || || || | ||||||||||||| Sbjct 96990 GGTCACCTGCACCTGTCGGCGAAGGGTAGACACACGCTGGTCCGTTTAGTGTAGCGCGCG 96931 Query 176 TGCGGCCC 183 ||| |||| Sbjct 96930 TGCAGCCC 96923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751816505420