Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq273 140 1e-30 seq1921 129 2e-27 seq1492 127 9e-27 seq19356 123 1e-25 seq1171 122 4e-25 seq8 113 2e-22 seq251 100 1e-18 seq2908 98.7 4e-18 seq321 98.7 4e-18 seq1213 89.7 2e-15 seq2098 82.4 3e-13 seq1856 77.0 1e-11 seq222 75.2 5e-11 >seq273 Length=1578729 Score = 140 bits (154), Expect = 1e-30 Identities = 100/115 (87%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| | || ||||||| |||||||||||||||| Sbjct 277491 GGACCCGAAAGATGGTGAACTATGCCTGGGCACGGCGAAGCCAAAGGAAACTCTGGTGGA 277550 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||| ||| ||||||||||| ||||| | |||||||| ||||||| Sbjct 277551 GGTCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACTTGGGTATGGGGGCGA 277605 >seq1921 Length=265374 Score = 129 bits (142), Expect = 2e-27 Identities = 98/115 (85%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT--GGTGGA 628 |||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||| Sbjct 93669 ACCCGAAATATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTCTGGTGGA 93728 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||| ||| |||||||||| ||||| | ||||||||||||||| Sbjct 93729 GGTCCGCAGCGGTCCTGAAGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 93783 >seq1492 Length=400294 Score = 127 bits (140), Expect = 9e-27 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| |||||| | | ||||| |||||| Sbjct 94570 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAC 94629 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 94630 ACCGGCGCGAGACCGATAGCGGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 94689 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || ||||||| Sbjct 94690 AGAGAGTTCAAGAGGGCGTGAAA 94712 >seq19356 Length=249 Score = 123 bits (136), Expect = 1e-25 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || |||| |||||| | | ||||| |||||| Sbjct 65 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAC 124 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||||| ||||||| | | ||||| ||||||| |||||| | Sbjct 125 ACCGGCGTGAGACCGATAGCGGACAAGTACCATAAGGGAAAGTTGAAAAGAACTTTGAAG 184 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||| Sbjct 185 AGAGAGTTCAAGAGGGAGTGAAA 207 >seq1171 Length=550567 Score = 122 bits (134), Expect = 4e-25 Identities = 96/114 (84%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 ||||||||||||||||||||||| ||| |||| |||||||||||||||||| |||||| Sbjct 240000 GACCCGAAAGATGGTGAACTATGTCTGGGCAGGGCGAAGCCAGAGGAAACTCTCGTGGAG 239941 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| |||| ||| ||||||||||| || || | ||||||||||||||| Sbjct 239940 G--TGCATCGGTCCTGACGTGCAAATCGGTCCTCTGACCTGGGTATAGGGGCGA 239889 >seq8 Length=4968905 Score = 113 bits (124), Expect = 2e-22 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||| |||||||||| |||||| || |||| ||||||||||||||||||||| || Sbjct 424748 GGACCCAAAAGATGGTGCACTATGTCTAGGCAGGGCGAAGCCAGAGGAAACTCTGGTTGA 424807 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||| ||| ||||||||| ||||| | ||||||||||||||| Sbjct 424808 TGTCCGCAGCGGTCCTGATGTGCAAATCAGTCGTCCGACCTGGGTATAGGGGCGA 424862 >seq251 Length=1638683 Score = 100 bits (110), Expect = 1e-18 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||| | | || ||| |||||| | |||| |||| || Sbjct 193175 GAGTCGGGTTGTTTGGGAATGCAACCCAAAGCGGGTGGTAAACTCTATCTACAGCTCAAC 193116 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||| |||||||| ||||||| | | ||||| ||||||| |||||| | Sbjct 193115 ACAGGCACGAGAACGATAGCGAACAAGTATCATAAGGGAAAGTTGAAAAGAACTTTGAAG 193056 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| | || ||||||| Sbjct 193055 AGAGAGTTCAGGAGGGCGTGAAA 193033 >seq2908 Length=93689 Score = 98.7 bits (108), Expect = 4e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 |||| |||||||||||||||||||||||||| | ||||||| ||| ||||||||||| | Sbjct 46264 AGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCACAGCGGTCCTGACGTGCAAATCGGT 46205 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||| | ||| ||||||||||| Sbjct 46204 CGTCCGACCTGGTTATAGGGGCGA 46181 >seq321 Length=1598784 Score = 98.7 bits (108), Expect = 4e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 |||| |||||||| ||||||||||||||||| ||||||||| ||| |||||||||| | Sbjct 963402 AGGGCGAAGCCAGTGGAAACTCTGGTGGAGGTCCGCAGCGGTCCTGACGTGCAAATCAGT 963461 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||| | ||||||||||||||| Sbjct 963462 CGTCCGACCTGGGTATAGGGGCGA 963485 >seq1213 Length=529218 Score = 89.7 bits (98), Expect = 2e-15 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| |||||| | | ||||| |||||| Sbjct 253032 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAC 252973 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTA 128 | ||| ||||||||||||| ||||||| Sbjct 252972 ACCGGCGCGAGACCGATAGCGGACAAGTA 252944 >seq2098 Length=211726 Score = 82.4 bits (90), Expect = 3e-13 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 ||||||||||||||| ||||||||| ||| ||||||||||| ||||| | ||||||| Sbjct 27570 AAACTCTGGTGGAGGTCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTAT 27629 Query 676 AGGGGCGA 683 |||||||| Sbjct 27630 AGGGGCGA 27637 >seq1856 Length=280690 Score = 77.0 bits (84), Expect = 1e-11 Identities = 80/105 (76%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||| | ||| ||||||||||||| ||||||| || | ||||| || |||| |||| Sbjct 107272 TAAACACCGGCGCGAGACCGATAGCGGACAAGTATCGTAAGGGAAAGTTGGAAAGAACTT 107331 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || | |||||||| || || ||||||| |||| | ||| || || Sbjct 107332 TGAAGAGAGAGTTCAAGAGGGCGTGAAACTGTTAAGAGGTAAACG 107376 >seq222 Length=1741602 Score = 75.2 bits (82), Expect = 5e-11 Identities = 96/131 (73%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| | || ||| ||||||||||| | || |||| ||| || ||| ||||| ||||| Sbjct 147102 GAGTGGGGTAGTTAGGGAATGCAGCCCAAAGTGGGTGGTCAACTTCATCTAAGGCTAACC 147043 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || ||| ||||| |||| | | ||||| | | |||| ||||||| ||||| | Sbjct 147042 ATGGGCACAAGACCAATAGTGGAAAAGTACCATTA-AGAAAATTGAAAAGAACTTTCAAT 146984 Query 160 AGAGAGTTAAA 170 |||||||| || Sbjct 146983 AGAGAGTTCAA 146973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079459717400