Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2908 188 1e-45 seq251 179 7e-43 seq273 174 3e-41 seq274 159 7e-37 seq1213 152 1e-34 seq262 145 1e-32 seq475 143 5e-32 seq1217 136 7e-30 seq399 131 3e-28 seq952 120 6e-25 seq1892 96.9 7e-18 seq1606 80.6 5e-13 >seq2908 Length=93689 Score = 188 bits (208), Expect = 1e-45 Identities = 199/258 (77%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | | ||| |||||||||||||||| Sbjct 85705 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATCGAG-CAATAACAGGTCTGTG 85648 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||| ||||||||||| | ||| || || | Sbjct 85647 ATGCCCTTAGATGTCCGGGGCTGCACGCACGCTACACTGAACGGACCAGCGTGTGTCTAC 85588 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| |||| |||||| | | || | | ||||| | ||||| | | |||| Sbjct 85587 CCTTCGCCGACAGGTGCGGGTAACCCGCTGAACCCCGTTCGTGATAGGGATTGGGGATTG 85528 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||| ||||||||| ||| ||||||||| Sbjct 85527 CAATTATTTCCCATGAACGAGGAATTCCCAGTAAGTGCGTGTCATAAGCTTGCGTTGATT 85468 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 85467 AAGTCCCTGCCCTTTGTA 85450 >seq251 Length=1638683 Score = 179 bits (198), Expect = 7e-43 Identities = 197/258 (76%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | | ||| ||||||||| |||||| Sbjct 194366 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATCGAG-CAATAACAGATCTGTG 194309 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||||||||||| | ||| || || | Sbjct 194308 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAACGGACCAGCGTGTGTCTAC 194249 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| |||| |||||| | | || | | ||||| | ||||| | | |||| Sbjct 194248 CCTTCGCCGACAGGTGCGGGTAACCCGCTGAACCCCGTTCGTGATAGGGATCGGGGATTG 194189 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | ||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 194188 CAATTATTTCCCATGTACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 194129 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||| ||||||||||| Sbjct 194128 AAGTCCATGCCCTTTGTA 194111 >seq273 Length=1578729 Score = 174 bits (192), Expect = 3e-41 Identities = 220/297 (74%), Gaps = 8/297 (3%) Strand=Plus/Plus Query 36 TGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGC---CGGCTTCTTAGAGGGACTATCGGC 92 |||||| |||| | | | | ||||| |||| | |||||||||||||| | ||| Sbjct 275643 TGCTAACTAGCTACGTGACCCTCGGCGGTTCGCGTCCAACTTCTTAGAGGGACAAGTGGC 275702 Query 93 -TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGC 151 | |||| | | || | ||| |||||||||||||||||||||||||||||| | |||| Sbjct 275703 GTTCAGCC-ACGCGAGATCGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGC 275760 Query 152 CGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGT 211 |||||||||||||||||| | ||| | || | | |||||| | |||| |||| Sbjct 275761 TGCACGCGCGCTACACTGAACGGACCAGTGTGTCTACC--CTTGGCTGACAGGTGCGGGT 275818 Query 212 AATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 271 || | | || | | ||||| | |||| | |||||||||||| | | | |||||| Sbjct 275819 AACCCACTGAACCCCGCTCGTGATAAGGATCAGGGATTGCAATTATTTCCCATGAACGAG 275878 Query 272 GAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| || |||||| ||| ||||| ||| || ||||||| |||||||||||||||| Sbjct 275879 GAATTCCCAGTAAGTGCGGGTCATAAGCTAGCATTGATTAAGTCCCTGCCCTTTGTA 275935 >seq274 Length=1577701 Score = 159 bits (176), Expect = 7e-37 Identities = 167/216 (77%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| | Sbjct 1188651 GCAATAACAGGTCTGTGATGCCCTTAGATGTCTAGGGCTGCACACGCGCTACACTGAACG 1188710 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG-TCGT 232 ||| || || | |||| ||| |||| |||||| | | | ||| | | |||| Sbjct 1188711 GACCAGCGTGTGGCTACCCTTTGCCAACAGGTGCGGGTAA-CACGCTGAACCCCGTTCGT 1188769 Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292 | | ||||| | | |||||||||||| | | | |||||||||| || |||||| || || Sbjct 1188770 GATAGGGATCGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGTACGGGT 1188829 Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| || | ||||||||| |||||||||||||||| Sbjct 1188830 CATAAG--CTCGTTGATTAAGTCCCTGCCCTTTGTA 1188863 >seq1213 Length=529218 Score = 152 bits (168), Expect = 1e-34 Identities = 166/218 (76%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| | Sbjct 253706 GCAATAACAGGTCTGTGATGCCCTTAGATGTCTGGGGCTGCATGCGCGCTACACTGAATG 253647 Query 174 AGCCAACGAGTTCATCACCTTGGCCG--GA-AGGTCTGGGTAATCTTGTTAAACTCTGTC 230 ||| || || | |||| |||| || |||| |||||| | | || | | || Sbjct 253646 GACCAGCGTGTGTCTACCCTTCGCCGCCGACAGGTGCGGGTAACCCGCTGAACCCCATTC 253587 Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGT 290 ||| | ||||| | | |||||||||||| | |||||||||| | ||||| ||| Sbjct 253586 GTGATAGGGATCGGGGATTGCAATTATTTTCCACGAACGAGGAATTCTCGGTAAGTGCGG 253527 Query 291 GTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||| ||||||||||| || ||||||||||||| Sbjct 253526 GTCATAAGCTCGCGTTGATTAAGTTCCTGCCCTTTGTA 253489 >seq262 Length=1609165 Score = 145 bits (160), Expect = 1e-32 Identities = 190/258 (74%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | | ||| |||||| ||||||||| Sbjct 412058 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATCGAG-CAATAAAAGGTCTGTG 412001 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||| ||||||||| | |||| |||||||| |||||||| | ||| || || | Sbjct 412000 ATGCTCTTAGATGTCCGGGGCTGCACGCGC--TACACTGAATGGACCAGCGTGTGTCTAC 411943 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| || | |||| |||||| | | | | | ||||| | ||||| | | |||| Sbjct 411942 CCTTTGCTGACAGGTGCGGGTAACCAGCTGAGCCCCGTTCGTGATAGGGATCGGGGATTG 411883 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||| ||| | | | |||||||||| || ||||| ||| | ||| | | |||||||||| Sbjct 411882 CAATGATTTCCCATGAACGAGGAATTCCCAGTAATTGCGGGCCATAAACTCGCGTTGATT 411823 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 411822 AAGTCCCTGCCCTTTGTA 411805 >seq475 Length=1163320 Score = 143 bits (158), Expect = 5e-32 Identities = 165/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA-CA 172 ||||||||||||||||| ||||||||||||| | || ||||| ||||| |||||| | Sbjct 154276 GCAATAACAGGTCTGTGGTGCCCTTAGATGTCCGTGGGTGCACGTGCGCTGCACTGAACG 154217 Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-G 231 |||| | | | | |||| |||| |||| | |||| | | | ||| |||| | Sbjct 154216 GAGC-AGCATGCGTCTACCCTTCGCCGACAGGTGCGAGTAACCC-GCTGAACCCTGTTTG 154159 Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 || | | ||| | | ||||||| |||| | | | |||||||||| || |||||| ||| | Sbjct 154158 TGATAGAGATCGGGGATTGCAAATATTTCCCATGAACGAGGAATTCCCAGTAAGTGCGGG 154099 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||| ||||||||||| |||||||||||||||| Sbjct 154098 TCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 154062 >seq1217 Length=526419 Score = 136 bits (150), Expect = 7e-30 Identities = 191/260 (73%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||| ||||||||| | |||| |||| || | ||||| |||||||| ||||||| Sbjct 324840 CTTCCTAGAGGGACAAGTGGCTTTCAGCCACACGA-GATTGAG-CAATAACATGTCTGTG 324783 Query 131 ATGCCCTTAGATGTTCTGGGCC-GCACGCGCGCTACACTGA-CAGAGCCAACGAGTTCAT 188 |||| ||||||||| | ||| | ||||| |||||||||||| |||| ||| || | | Sbjct 324782 ATGCTCTTAGATGTCCGGGGGCTGCACGTGCGCTACACTGAACAGA-CCAGCGTATGTCT 324724 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||| |||| | | |||||| | | | ||| | ||| | ||||| | | || Sbjct 324723 ACCCTTTGCCGACTGATGGGGGTAACCCGCTGTACCTCGTTTGTGATAGGGATCGGGGAT 324664 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 |||||||||| | | | | |||||||| || |||||| || ||||| ||| | ||||| Sbjct 324663 TGCAATTATTTCCCATGAGCGAGGAATTCCCAGTAAGTGCTGGTCATAAGCTTGGGTTGA 324604 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||| ||||||||||||| || Sbjct 324603 TTAGGTCCCTGCCCTTTTTA 324584 >seq399 Length=1285932 Score = 131 bits (144), Expect = 3e-28 Identities = 186/255 (73%), Gaps = 5/255 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | ||| ||||| ||| |||| || |||| Sbjct 1016459 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACAGAACATTGAG-CAACAACAAGTTTGTG 1016402 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATC 189 |||||||||||||| | |||| |||| || ||| |||||| | ||| | || || | Sbjct 1016401 ATGCCCTTAGATGTCCGGGGCAGCACACGAGCTGCACTGAACGGACCAGCATGTGTCTAC 1016342 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| | | ||||| |||||| | | || | | ||||| | ||||| | | ||| Sbjct 1016341 TCCTCG-CTAAAAGGTGCGGGTAACCCGCTGAACCCCGTTCGTGATAGGGATCGGGGATT 1016283 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||||| | | ||| |||||| || |||||| ||| ||||| ||| |||||||| Sbjct 1016282 GCAATTATTTACCATGAACAAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGAT 1016223 Query 310 TACGTCCCTGCCCTT 324 || |||||| |||| Sbjct 1016222 TAACTCCCTGTCCTT 1016208 >seq952 Length=684190 Score = 120 bits (132), Expect = 6e-25 Identities = 157/216 (73%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||| ||||||||||||||||| ||||||||| | |||| ||||| | ||| ||| | Sbjct 485485 GCAGTAACAGGTCTGTGATGCTCTTAGATGTCCGGGGCTGCACGTATGGCACATTGAACG 485426 Query 174 AGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232 ||| | || || | |||| |||| ||| ||||| | || | | |||| Sbjct 485425 GACCAGCATGTGTCCTACCCTTTGCCGACTGGTGCAGGTAACCCGCAGAACCCCGTTCGT 485366 Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292 | | ||| | | |||||||||||| | | |||||||||| || |||||| ||| || Sbjct 485365 GATACAGATCGGGGATTGCAATTATTTCCCACGAACGAGGAATTCCCAGTAAGTGCGGGT 485306 Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| ||| ||||||||||| ||||||| |||||||| Sbjct 485305 CATAAGCTCGCGTTGATTAAGTCCCTGACCTTTGTA 485270 >seq1892 Length=291281 Score = 96.9 bits (106), Expect = 7e-18 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 148 GGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCT 207 |||| |||||||||||||||| | | ||| || || | |||| |||| |||| Sbjct 96923 GGGCTGCACGCGCGCTACACTAAACGGACCAGCGTGTGTCTACCCTTCGCCGACAGGTGC 96982 Query 208 GGGTAATCTTGTTAAACTCTGTC-GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCA 266 ||| | | | | || | || ||| | || || || |||||||||||| | | | | Sbjct 96983 AGGTGACCC-GCTGGACCCAGTTTGTGATAGGAATCAAGGATTGCAATTATTTCCCATGA 97041 Query 267 ACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326 || |||||| | ||||||| || |||| ||| ||||||||||| |||||||||||||| Sbjct 97042 ACAAGGAATTCTTAGTAAGTGCAGATCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTG 97101 Query 327 TA 328 || Sbjct 97102 TA 97103 >seq1606 Length=352080 Score = 80.6 bits (88), Expect = 5e-13 Identities = 84/106 (79%), Gaps = 6/106 (6%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||||| | ||| ||| || | | || | ||| ||||||||||||||| Sbjct 95603 CTTCTTAGAGGGACCAATGGCATTCAGGCACACG--AGATGGAG-CAATAACAGGTCTGT 95547 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACAGA 174 |||||||||| ||| || |||| ||| || ||||||||| ||||| Sbjct 95546 GATGCCCTTACATGCTCGGGGCTACACACGTGCTACACTGAACAGA 95501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946961419264