Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq230 89.7 4e-13 seq425 82.4 6e-11 >seq230 Length=1702269 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 61247 AGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACG 61306 |||| || | || |||||| ||||| || ||||| | || ||||| |||||||| | Sbjct 258099 AGAACTTGGTTGAGCGTTTCAGTCAGGAAGTACAAGTCACAGAAGCGCGCTGTTTCTATG 258040 Query 61307 GCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCAT 61358 |||| || ||||| ||||||||| | || ||||||||||||| ||||||| Sbjct 258039 GCTTTCAAATTGCAATGGAGAATATTCATCCGGAGATGTACAGCCTTCTCAT 257988 >seq425 Length=1236905 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 61258 GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317 || |||||| ||||| | ||||| | || ||||| |||||||| || || || ||| Sbjct 158842 GAGCGTTTCAGTCAGGAAATACAAGTCACAGAAGCGCGCTGTTTCTATGGATTTCAAATT 158783 Query 61318 GCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTA 61367 || |||||||| | || |||||||||||||| ||||||| || || || Sbjct 158782 GCAATGGAGAACATTCATTCGGAGATGTACAGCCTTCTCATTGACACATA 158733 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 61258 GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317 || |||||| ||||| | ||||| | || ||||| |||||||| || || || ||| Sbjct 160628 GAGCGTTTCAGTCAGGAAATACAAGTCACAGAAGCGCGCTGTTTCTATGGATTTCAAATT 160569 Query 61318 GCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTA 61367 || |||||||| | || |||||||||||||| ||||||| || || || Sbjct 160568 GCAATGGAGAACATTCATTCGGAGATGTACAGCCTTCTCATTGACACATA 160519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397445955072320