Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq5 113 3e-23 seq290 107 1e-21 >seq5 Length=144167370 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| ||| |||| |||| ||||| ||| Sbjct 4473672 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCTCAGCGGGTCATGGGAATAACGCCGCTG 4473731 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct 4473732 GATCGCTAGTCGGCATCGTTTATGGTTGGAACTACGACGGTATCTGATCGTCTTCGA 4473788 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| ||| ||| |||| ||||| |||| Sbjct 4438635 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCTCGGCGGGTCATGGGAATAACGCCGCCG 4438694 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||| ||| |||||||||||||||||||||||| || Sbjct 4438695 GATCACTAGTTGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTTGA 4438751 >seq290 Length=26288 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| ||| ||| |||| ||||| |||| Sbjct 15440 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCTCGGCGGGTCATGGGAATAACGCCGCCG 15499 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| |||| |||||||||||||||||| |||||||| Sbjct 15500 GATCTCTAGTCGGCATCGTTTATGGTTGGAACTACGACGGTATCTGATAGTCTTCGA 15556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278118033870