Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq7 141 4e-31 seq16 136 2e-29 seq5 131 7e-28 seq1 89.7 2e-15 >seq7 Length=144084680 Score = 141 bits (156), Expect = 4e-31 Identities = 99/113 (88%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 109107271 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 109107212 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 || || |||||| ||| ||||||||||| ||||| | ||||||||||||| Sbjct 109107211 GGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGC 109107159 >seq16 Length=98932710 Score = 136 bits (150), Expect = 2e-29 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 5485876 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 5485935 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | |||||| ||| |||||||||| ||||| | ||||||||||||||| Sbjct 5485936 GGTCTGTAGCGGTCCTGACGTGCAAATCAGTCGTCCGACCTGGGTATAGGGGCGA 5485990 >seq5 Length=144167370 Score = 131 bits (144), Expect = 7e-28 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| ||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 4498479 GAGTCGGGTTGTTTGTGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 4498420 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 4498419 ACCGGCACGAGACCGATAGCGGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 4498360 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||| ||| |||| | ||| || || Sbjct 4498359 AGAGAGTTCAAGAGGGCGTAAAACTGTTAAGAGGTAAACG 4498320 Score = 122 bits (134), Expect = 4e-25 Identities = 94/112 (84%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 88798451 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 88798392 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 || | |||||| ||| | |||||||| | ||| || ||| |||||||| Sbjct 88798391 GGTCTGTAGCGGTCCTGACATGCAAATCAGTTGTCCAACCTGGTTATAGGGG 88798340 Score = 98.7 bits (108), Expect = 4e-18 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 56 GAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGA 115 ||||||||| | || |||| |||||| | | ||||| |||||||| ||| |||||||| Sbjct 4473025 GAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAATACCGGCACGAGACCGA 4472966 Query 116 TAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167 ||||| ||||||| || | ||||| ||||||| |||||| | |||| ||| Sbjct 4472965 TAGCGGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAGAGAGGGTT 4472914 >seq1 Length=219802468 Score = 89.7 bits (98), Expect = 2e-15 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||| ||||||||| |||| ||||| || ||||||| || ||||| |||||| Sbjct 68035570 ACCCGAAAGATTGTGAACTATACCTGGGTAGGGCGACGCCAGAGTAAGCTCTGCTGGAGG 68035629 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 | || ||| | | |||||||| || || ||| | || |||||||| Sbjct 68035630 TCCATAGTGGTCCAGACGTGCAAAACGGTCATCATACCTGAGTATAGGG 68035678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2077682692150