Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq5 141 4e-32 seq99398 122 4e-26 seq1 93.3 2e-17 seq8 77.0 1e-12 >seq5 Length=144167370 Score = 141 bits (156), Expect = 4e-32 Identities = 94/102 (92%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||| Sbjct 4498687 GGAAAAGAAACTAACCAGGATTCCCCCAGTAACGGCGAGTAAAGAGGGAAGAGCCCAGCG 4498628 Query 61 CCGAATCCCCGCCC-CGCGGTGGGGCGCGGGACATGTGGCGT 101 |||||||||||||| | |||| |||||| ||| ||||||||| Sbjct 4498627 CCGAATCCCCGCCCGCCCGGT-GGGCGCTGGAAATGTGGCGT 4498587 >seq99398 Length=214 Score = 122 bits (134), Expect = 4e-26 Identities = 79/87 (91%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 CAGGATTCCCCCAGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCGCCGAATCCCCGCCCG 60 Query 76 GCGGTGGGGCGCGGGACATGTGGCGTA 102 | | ||||||||||| ||||||||| Sbjct 61 CCCGGCGGGCGCGGGACGTGTGGCGTA 87 >seq1 Length=219802468 Score = 93.3 bits (102), Expect = 2e-17 Identities = 80/97 (82%), Gaps = 4/97 (4%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||| | |||| || |||| |||| ||||||||| ||| | Sbjct 68035232 GGAAAAGAAACTAACCAGGATTCGCCCAGTTACAGCGAATGAAGAGGGAAGAGTTCAGTG 68035291 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTG 97 ||||||| || || |||| |||| ||||| ||||| Sbjct 68035292 CCGAATCACCACC---CGGT-GGGCACGGGAAATGTG 68035324 >seq8 Length=121245977 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 || |||||||||||||||||||| | ||| |||| |||||| ||||||||||||||| Sbjct 79036424 AATAGAAACTAACCAGGATTCCCCCGGTAGCGGCAAGTGAAGAGGGAAGAGCCCAGC 79036368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230166648720