Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13]
6,822 sequences; 1,440,398,454 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq3419 107 1e-21
seq173 107 1e-21
>seq3419
Length=4703
Score = 107 bits (118), Expect = 1e-21
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || ||| ||| ||| |||| ||||| ||||
Sbjct 397 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCTCGGCGGGTCATGGGAATAACGCCGCCG 456
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 457 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 513
>seq173
Length=227986
Score = 107 bits (118), Expect = 1e-21
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || ||| ||| ||| |||| ||||| ||||
Sbjct 226207 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCTCGGCGGGTCATGGGAATAACGCCGCCG 226266
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 226267 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 226323
Score = 104 bits (114), Expect = 1e-20
Identities = 94/117 (80%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || ||| ||| ||| |||| ||||| ||||
Sbjct 92772 GAACCCAAAGACTTTG-TTTCCCGGAAGCTGCTCGGCGGGTCATGGGAATAACGCCGCCG 92830
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 92831 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 92887
Score = 100 bits (110), Expect = 2e-19
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 5 CCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATC 64
|||||||||||| |||| || ||| ||| ||| |||| ||||| |||| ||||
Sbjct 78157 CCAAAGACTTTGGTTTCCCGGAAGCTGCTCGGCGGGTCATGGGAATAACGCCGCCGGATC 78216
Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 78217 GCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 78269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278382194580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |