Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13]
6,822 sequences; 1,440,398,454 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq3419 89.7 6e-16
seq173 89.7 6e-16
seq7 89.7 6e-16
>seq3419
Length=4703
Score = 89.7 bits (98), Expect = 6e-16
Identities = 141/193 (73%), Gaps = 8/193 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||| ||| | |||| | ||||
Sbjct 661 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGAAGTATCCAGGCG 719
Query 70 TAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA 127
|||||||| ||||||||||||||| |||| ||||| | || || | | |||
Sbjct 720 ACGCGGCCTGCTTGGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCCGGGACA 779
Query 128 C-CAATGAAG-GCATACGGG-CTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCGC 182
| || | ||| |||| ||| | || ||||| | |||||||| | || ||| |||||
Sbjct 780 CTCAGTCAAGAGCATCGGGGAGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTAGCTCGC 839
Query 183 CGTGAGGCGGACC 195
| ||||||||
Sbjct 840 CTCACGGCGGACC 852
>seq173
Length=227986
Score = 89.7 bits (98), Expect = 6e-16
Identities = 141/193 (73%), Gaps = 8/193 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||| ||| | |||| | ||||
Sbjct 226471 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGAAGTATCCAGGCG 226529
Query 70 TAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA 127
|||||||| ||||||||||||||| |||| ||||| | || || | | |||
Sbjct 226530 ACGCGGCCTGCTTGGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCCGGGACA 226589
Query 128 C-CAATGAAG-GCATACGGG-CTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCGC 182
| || | ||| |||| ||| | || ||||| | |||||||| | || ||| |||||
Sbjct 226590 CTCAGTCAAGAGCATCGGGGAGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTAGCTCGC 226649
Query 183 CGTGAGGCGGACC 195
| ||||||||
Sbjct 226650 CTCACGGCGGACC 226662
Score = 84.2 bits (92), Expect = 3e-14
Identities = 142/193 (74%), Gaps = 11/193 (6%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||| ||| | |||| | ||||
Sbjct 78415 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGAAGTATCCAGGCG 78473
Query 70 TAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA 127
|||||||| || |||||||||||| |||| ||||| | | | | || ||| |||
Sbjct 78474 ACGCGGCCTGCTTGGA-CACTCTAATTTTTTCAA-GTAAACG-CTTCGGGCCCCCGGACA 78530
Query 128 C-CAATGAAG-GCATACGGG-CTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCGC 182
| || | ||| |||| ||| | || ||||| | |||||||| | || ||| |||||
Sbjct 78531 CTCAGTCAAGAGCATCGGGGAGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTAGCTCGC 78590
Query 183 CGTGAGGCGGACC 195
| ||||||||
Sbjct 78591 CTCACGGCGGACC 78603
Score = 78.8 bits (86), Expect = 1e-12
Identities = 140/193 (73%), Gaps = 10/193 (5%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||| ||| | |||| | ||||
Sbjct 93034 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGAAGTATCCAGGCG 93092
Query 70 TAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA 127
||||||| ||||||||||||||| |||| ||||| | || || | | |||
Sbjct 93093 ACGCGGCCTGCTG-GAACACTCTAATTTTTTCAA-GTAAACGCTTCGGGCCCCCGGGACA 93150
Query 128 C-CAATGAAG-GCATACGGG-CTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCGC 182
| || | ||| |||| ||| | || ||||| | |||||||| | || ||| |||||
Sbjct 93151 CTCAGTCAAGAGCATCGGGGAGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTAGCTCGC 93210
Query 183 CGTGAGGCGGACC 195
| ||||||||
Sbjct 93211 CTCACGGCGGACC 93223
>seq7
Length=117177943
Score = 89.7 bits (98), Expect = 6e-16
Identities = 143/194 (74%), Gaps = 10/194 (5%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||| ||| | |||| | ||||
Sbjct 88496018 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGAAGTATCCAGGCG 88495960
Query 70 TAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCT-GGTTCCTCCGCAC 126
|||||||| ||||||||||||||| |||| || ||| || | || || | | ||
Sbjct 88495959 ACGCGGCCTGCTTGGAACACTCTAATTTTTTCAAAGT-AAACTCTTCGGGCCCCCGGGAC 88495901
Query 127 AC-CAATGAAG-GCATACGGG-CTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCG 181
|| || | ||| |||| ||| | || ||||| | |||||||| | || ||| ||||
Sbjct 88495900 ACTCAGTCAAGAGCATCGGGGAGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTAGCTCG 88495841
Query 182 CCGTGAGGCGGACC 195
|| ||||||||
Sbjct 88495840 CCTCACGGCGGACC 88495827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595160664348
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |