Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13]
6,822 sequences; 1,440,398,454 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq173 188 1e-45
seq7 172 1e-40
>seq173
Length=227986
Score = 188 bits (208), Expect = 1e-45
Identities = 201/259 (78%), Gaps = 5/259 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | | ||| ||||||||||||||||
Sbjct 225933 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATCGAG-CAATAACAGGTCTGTG 225876
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| |||||||||||||||||| | || || || |
Sbjct 225875 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAACGGATCAGCGTGTGTCTAC 225816
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGT-CGTGCTGGGGATAGAGCATT 249
||| |||| |||| |||||| | ||| ||| | || |||| | ||||| | | |||
Sbjct 225815 CCTACGCCGACAGGTGCGGGTAACCC-GTTGAACCCCGTTCGTGATAGGGATCGGGGATT 225757
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
||||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||
Sbjct 225756 GCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGAT 225697
Query 310 TACGTCCCTGCCCTTTGTA 328
|| ||||||||||||||||
Sbjct 225696 TAAGTCCCTGCCCTTTGTA 225678
Score = 185 bits (204), Expect = 2e-44
Identities = 201/259 (78%), Gaps = 6/259 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | | ||| ||||||||||||||||
Sbjct 92502 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATCGAG-CAATAACAGGTCTGTG 92445
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| |||||||||||||||||| | || || || |
Sbjct 92444 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAACGGATCAGCGTGTGTCTAC 92385
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGT-CGTGCTGGGGATAGAGCATT 249
||| |||| |||| |||||| | ||| ||| | || |||| | ||||| | | |||
Sbjct 92384 CCTACGCCGACAGGTGCGGGTAACCC-GTTGAACCCCGTTCGTGATAGGGATCGGGGATT 92326
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
||||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||
Sbjct 92325 GCAATTATTTCCCATGAACGAGGAAT-CCCAGTAAGTGCGGGTCATAAGCTCGCGTTGAT 92267
Query 310 TACGTCCCTGCCCTTTGTA 328
|| ||||||||||||||||
Sbjct 92266 TAAGTCCCTGCCCTTTGTA 92248
Score = 168 bits (186), Expect = 1e-39
Identities = 197/258 (76%), Gaps = 6/258 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | | ||| ||||||||||||||||
Sbjct 77881 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATCGAG-CAATAACAGGTCTGTG 77824
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| |||||||||||||||||| | || || || |
Sbjct 77823 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAACGGATCAGCGTGTGTCTAC 77764
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| |||| |||| |||||| | || || | | ||||| | ||||| | | | ||
Sbjct 77763 CCTACGCCGACAGGTGCGGGTAA-CCCGTGAACCCCGTTCGTGATAGGGATCGGGGA-TG 77706
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | ||||||| || || |||||| ||| ||||| ||| ||||||||||
Sbjct 77705 CAATTATTTCCCATGAACGAGG-ATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 77647
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 77646 AAGTCCCTGCCCTTTGTA 77629
>seq7
Length=117177943
Score = 172 bits (190), Expect = 1e-40
Identities = 198/259 (76%), Gaps = 8/259 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | | ||| ||||||||||||||||
Sbjct 88496529 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATCGAG-CAATAACAGGTCTGTG 88496586
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||||| | |||| |||||||||||||||||| | || || || |
Sbjct 88496587 TTGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAACGGATCAGCGTGTGTCTAC 88496646
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGT-CGTGCTGGGGATAGAGCATT 249
||| |||| |||| |||||| | ||| ||| | || |||| | ||| | | |||
Sbjct 88496647 CCTACGCCGACAGGTGCGGGTAACCC-GTTGAACCCCGTTCGTGATAGGG---GGGGATT 88496702
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
||||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||
Sbjct 88496703 GCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGAT 88496762
Query 310 TACGTCCCTGCCCTTTGTA 328
|| ||||||||||||||||
Sbjct 88496763 TAAGTCCCTGCCCTTTGTA 88496781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947135382016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |