Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3419 441 2e-121 seq173 441 2e-121 seq7 405 2e-110 seq2 107 6e-21 >seq3419 Length=4703 Score = 441 bits (488), Expect = 2e-121 Identities = 417/522 (80%), Gaps = 20/522 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 988 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 1047 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1048 TCCCCGCGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 1107 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 1108 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 1167 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| || ||||| | | |||||| | Sbjct 1168 AGGCGCAGAAAGTACCATCGAAAGTTGATAGGGCAGACATCCGAATGTATCGTCGCCGTC 1227 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCC----CGAAGGG 293 | || | |||||| | | ||||| || ||||||| | | || || ||| Sbjct 1228 ACGGGGACGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCGCGGGG 1287 Query 294 ----CG--TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAG 344 || |||| |||| ||| |||||| ||| | | || | ||| | | | | | Sbjct 1288 GCCCCGGATTGG-TTTTGGTCTGATAAATGCACGCATCCCTGGGGGTCAGCGCTCGTCGG 1346 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAA 402 ||||||||||||||||||||||||| |||||||| ||| | || | |||||| || Sbjct 1347 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACAGATGGAGCGATCAAAGGAA 1406 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACA 462 | ||||||||||||||||||||||||||||||||||||| | | |||||| || Sbjct 1407 CCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTACACG 1466 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 1467 TGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 1507 >seq173 Length=227986 Score = 441 bits (488), Expect = 2e-121 Identities = 417/522 (80%), Gaps = 20/522 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 93358 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 93417 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 93418 TCCCCGCGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 93477 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 93478 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 93537 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| || ||||| | | |||||| | Sbjct 93538 AGGCGCAGAAAGTACCATCGAAAGTTGATAGGGCAGACATCCGAATGTATCGTCGCCGTC 93597 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCC----CGAAGGG 293 | || | |||||| | | ||||| || ||||||| | | || || ||| Sbjct 93598 ACGGGGACGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCGCGGGG 93657 Query 294 ----CG--TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAG 344 || |||| |||| ||| |||||| ||| | | || | ||| | | | | | Sbjct 93658 GCCCCGGATTGG-TTTTGGTCTGATAAATGCACGCATCCCTGGGGGTCAGCGCTCGTCGG 93716 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAA 402 ||||||||||||||||||||||||| |||||||| ||| | || | |||||| || Sbjct 93717 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACAGATGGAGCGATCAAAGGAA 93776 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACA 462 | ||||||||||||||||||||||||||||||||||||| | | |||||| || Sbjct 93777 CCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTACACG 93836 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 93837 TGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 93877 Score = 441 bits (488), Expect = 2e-121 Identities = 417/522 (80%), Gaps = 20/522 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 226798 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 226857 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 226858 TCCCCGCGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 226917 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 226918 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 226977 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| || ||||| | | |||||| | Sbjct 226978 AGGCGCAGAAAGTACCATCGAAAGTTGATAGGGCAGACATCCGAATGTATCGTCGCCGTC 227037 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCC----CGAAGGG 293 | || | |||||| | | ||||| || ||||||| | | || || ||| Sbjct 227038 ACGGGGACGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCGCGGGG 227097 Query 294 ----CG--TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAG 344 || |||| |||| ||| |||||| ||| | | || | ||| | | | | | Sbjct 227098 GCCCCGGATTGG-TTTTGGTCTGATAAATGCACGCATCCCTGGGGGTCAGCGCTCGTCGG 227156 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAA 402 ||||||||||||||||||||||||| |||||||| ||| | || | |||||| || Sbjct 227157 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACAGATGGAGCGATCAAAGGAA 227216 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACA 462 | ||||||||||||||||||||||||||||||||||||| | | |||||| || Sbjct 227217 CCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTACACG 227276 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 227277 TGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 227317 Score = 437 bits (484), Expect = 3e-120 Identities = 417/522 (80%), Gaps = 21/522 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 78738 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 78797 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78798 TCCCCGCGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 78857 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 78858 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 78917 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| || ||||| | | |||||| | Sbjct 78918 AGGCGCAGAAAGTACCATCGAAAGTTGATAGGGCAGACATCCGAATGTATCGTCGCCGTC 78977 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCC----CGAAGGG 293 | || | |||||| | | ||||| || ||||||| | | || || ||| Sbjct 78978 -CGGGGACGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCGCGGGG 79036 Query 294 ----CG--TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAG 344 || |||| |||| ||| |||||| ||| | | || | ||| | | | | | Sbjct 79037 GCCCCGGATTGG-TTTTGGTCTGATAAATGCACGCATCCCTGGGGGTCAGCGCTCGTCGG 79095 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAA 402 ||||||||||||||||||||||||| |||||||| ||| | || | |||||| || Sbjct 79096 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACAGATGGAGCGATCAAAGGAA 79155 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACA 462 | ||||||||||||||||||||||||||||||||||||| | | |||||| || Sbjct 79156 CCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTACACG 79215 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 79216 TGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 79256 >seq7 Length=117177943 Score = 405 bits (448), Expect = 2e-110 Identities = 411/524 (78%), Gaps = 31/524 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCA--AAAGAGCCCTGTATCAGTATTTATTGTCACTAC 58 |||||||||| ||||||||| ||| |||||| ||||||| ||||| |||||||||| Sbjct 88495691 GTACTCATTCAAATTACAAGGCCCTCGAAAGAGTCCTGTATTGTTATTTTTTGTCACTAC 88495632 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 88495631 CTCCCCGCGTCGGGAGTGGGTAATTTGTGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 88495572 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||||||||||||||||||||||||||||||| |||| ||||||||||| | ||||||| Sbjct 88495571 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTGGTCACCATGG 88495512 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||||| | ||||||||||||||||||||||||| || ||||| | | |||||| Sbjct 88495511 TAGGCGCAGAAAGTACCATCGAAAGTTGATAGGGCAGACATCCGAATGTATCGTCGCCGT 88495452 Query 239 CTCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCC----CGAAGG 292 | | || | |||||| | ||||||| || ||||||| | | || || || Sbjct 88495451 CACGGGGACGTGCGATCGGCCCGAAGTTATCTAGAGTCACCAAAGCGGCCGGGGCGCGGG 88495392 Query 293 G---CG--TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAG 344 | || |||| |||| ||| |||||| || | | || | ||| | | | | | Sbjct 88495391 GGCCCGGATTGG-TTTTGGTCTGATAAATGCAGGCATCCCTGGGGGTCAGCGCTCGTCGG 88495333 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAA 402 ||||||||||||||||||||||||| |||||||| ||| | || | |||||| || Sbjct 88495332 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACAGATGGAGCGATCAAAGGAA 88495273 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG--ATTGCTTATACTTAGA 460 | |||||||||||||||| |||||||||||||| | ||| |||||| | Sbjct 88495272 CCATAACTGATTTAATGA-------GCAGTTTCACTGTACCGGCCATGC--GTACTTACA 88495222 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||| |||||||||| Sbjct 88495221 CGTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 88495179 Score = 170 bits (188), Expect = 6e-40 Identities = 137/163 (84%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA--GGTACTATCAAATAA 401 |||||||||| ||||||||||||||| |||||||| ||| | || | |||||| | Sbjct 87989246 GCATGTATTAACTCTAGAATTACCACAGTTATCCAAGTAACAGATGGAGCGATCAAAGGA 87989305 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || ||||||||||||||||||||||||||||||||||||| | | |||||| || Sbjct 87989306 ACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTACAC 87989365 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 87989366 GTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 87989407 >seq2 Length=170201513 Score = 107 bits (118), Expect = 6e-21 Identities = 87/104 (84%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| |||||||||||||||||||||| ||||||| |||||| | | |||||| | Sbjct 57438044 AACCATAACTGATTTAATGAGCCATTTGCAGTTTTACTGTACTGGCCGTGCGTACTTACA 57437985 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||| |||| |||| Sbjct 57437984 CGTGCATGGCTTAATCTTTGAGACAAGCATATG-GTACTAGCAG 57437942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510296960512