Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq343 118 5e-25 seq279 102 4e-20 >seq343 Length=2751252 Score = 118 bits (130), Expect = 5e-25 Identities = 87/99 (88%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| | Sbjct 2288421 GGAAAAGAAACTAACCAGGATTCC-TCAGTAATGGCGAGTGAACAGGGAAGAGCCCA--G 2288365 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGC 99 ||||||| || | |||||||| || |||| ||||||| Sbjct 2288364 CCGAATCACCTGTCAGCGGTGGGTCGGGGGATATGTGGC 2288326 >seq279 Length=3788456 Score = 102 bits (112), Expect = 4e-20 Identities = 80/96 (83%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| ||||||||||||||||||||||||| ||| | |||| ||| |||||||||||| Sbjct 1186724 GGAAAATAAACTAACCAGGATTCCCTCAGTAATGGCAAATGAATAGGAAAGAGCCCAGCG 1186783 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGT 96 || ||| || | || || ||||| | |||| |||| Sbjct 1186784 CCAAATGCCTGGCCTGCCGTGGGTCATGGGAAATGT 1186819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230355720000