Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq343 118 5e-25
seq279 102 4e-20
>seq343
Length=2751252
Score = 118 bits (130), Expect = 5e-25
Identities = 87/99 (88%), Gaps = 3/99 (3%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |
Sbjct 2288421 GGAAAAGAAACTAACCAGGATTCC-TCAGTAATGGCGAGTGAACAGGGAAGAGCCCA--G 2288365
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGC 99
||||||| || | |||||||| || |||| |||||||
Sbjct 2288364 CCGAATCACCTGTCAGCGGTGGGTCGGGGGATATGTGGC 2288326
>seq279
Length=3788456
Score = 102 bits (112), Expect = 4e-20
Identities = 80/96 (83%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||| ||||||||||||||||||||||||| ||| | |||| ||| ||||||||||||
Sbjct 1186724 GGAAAATAAACTAACCAGGATTCCCTCAGTAATGGCAAATGAATAGGAAAGAGCCCAGCG 1186783
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGT 96
|| ||| || | || || ||||| | |||| ||||
Sbjct 1186784 CCAAATGCCTGGCCTGCCGTGGGTCATGGGAAATGT 1186819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230355720000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |