Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5 154 3e-35 seq61 73.4 7e-11 >seq5 Length=45607681 Score = 154 bits (170), Expect = 3e-35 Identities = 189/256 (74%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | || | |||| ||| ||||| ||||||||||||||||| Sbjct 1434539 CTTCTTAGAAGGACAGTGGGGTGCAGCCACCTGAA--TTGAG-CAATAACAGGTCTGTGA 1434483 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | |||| ||| ||| |||||||||| | || | || | || | Sbjct 1434482 TGCCCTTAGATGTCCGGGGCTGCATGCGTACTACACTGACTGGCTCAGTGTGTGCCTCCC 1434423 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || ||| | || | |||||| | | || | | ||||| ||||||| | | |||| Sbjct 1434422 CTATGCCAGCAGATGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGAATTGT 1434363 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| | | | || ||||| | || |||||| || |||| ||| |||||||||| Sbjct 1434362 AATTATTCCCCATGAATGAGGACTTCCCAGTAAGTACGGGTCAGAAGCTTGCGTTGATTA 1434303 Query 312 CGTCCCTGCCCTTTGT 327 ||||||||||||||| Sbjct 1434302 AGTCCCTGCCCTTTGT 1434287 >seq61 Length=18009331 Score = 73.4 bits (80), Expect = 7e-11 Identities = 75/98 (77%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGT 290 ||| | ||||| || |||||||||||| | | |||| ||||||| || |||||| | | Sbjct 16325489 GTGATAGGGATCCAGGATTGCAATTATTCCCCATCAATGAGGAATTCCCAGTAAGTGTGG 16325548 Query 291 GTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||| | ||||| | |||| ||| ||||||| Sbjct 16325549 GTCATAAGCTTACCTTGATCAAGTCCGTGCTCTTTGTA 16325586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947005824000