Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq5 154 3e-35
seq61 73.4 7e-11
>seq5
Length=45607681
Score = 154 bits (170), Expect = 3e-35
Identities = 189/256 (74%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
||||||||| |||| | || | |||| ||| ||||| |||||||||||||||||
Sbjct 1434539 CTTCTTAGAAGGACAGTGGGGTGCAGCCACCTGAA--TTGAG-CAATAACAGGTCTGTGA 1434483
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
||||||||||||| | |||| ||| ||| |||||||||| | || | || | || |
Sbjct 1434482 TGCCCTTAGATGTCCGGGGCTGCATGCGTACTACACTGACTGGCTCAGTGTGTGCCTCCC 1434423
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|| ||| | || | |||||| | | || | | ||||| ||||||| | | ||||
Sbjct 1434422 CTATGCCAGCAGATGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGAATTGT 1434363
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
||||||| | | | || ||||| | || |||||| || |||| ||| ||||||||||
Sbjct 1434362 AATTATTCCCCATGAATGAGGACTTCCCAGTAAGTACGGGTCAGAAGCTTGCGTTGATTA 1434303
Query 312 CGTCCCTGCCCTTTGT 327
|||||||||||||||
Sbjct 1434302 AGTCCCTGCCCTTTGT 1434287
>seq61
Length=18009331
Score = 73.4 bits (80), Expect = 7e-11
Identities = 75/98 (77%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGT 290
||| | ||||| || |||||||||||| | | |||| ||||||| || |||||| | |
Sbjct 16325489 GTGATAGGGATCCAGGATTGCAATTATTCCCCATCAATGAGGAATTCCCAGTAAGTGTGG 16325548
Query 291 GTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| ||| | ||||| | |||| ||| |||||||
Sbjct 16325549 GTCATAAGCTTACCTTGATCAAGTCCGTGCTCTTTGTA 16325586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947005824000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |