Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq54 435 1e-119
seq170 405 2e-110
seq95 318 2e-84
seq343 273 7e-71
seq38 241 4e-61
seq492 138 4e-30
seq10 111 5e-22
seq204 105 2e-20
seq90 93.3 1e-16
seq34 80.6 9e-13
seq20 80.6 9e-13
>seq54
Length=18522067
Score = 435 bits (482), Expect = 1e-119
Identities = 276/299 (92%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||||
Sbjct 9632051 TCCCACTTATTCTACACCTCTCATGTCTCTTCACGGTGCCAGACTAGAGTCAAGCTCAAC 9631992
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||
Sbjct 9631991 AGGCTCTTCTTTCCCCACTGATTCCGCGAAGCCCGTTCCCTTGGCTGTGGTTACGCTGGA 9631932
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
| |||| |||||||||||||||||||||| ||||||||||| | ||||||||||||||||
Sbjct 9631931 TTGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGTGTGTCACTAATTAGATGA 9631872
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 9631871 CGAGGCGTTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCAT 9631812
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 9631811 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACACCA 9631753
>seq170
Length=7561184
Score = 405 bits (448), Expect = 2e-110
Identities = 261/285 (92%), Gaps = 9/285 (3%)
Strand=Plus/Plus
Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308
|||||||||||| ||| ||||| || | ||| ||| |||||||||||||||
Sbjct 1130834 CTACACCTCTCATGTCTCTTCAC-----CGTGCCAGA----AGCGCAACAGGGTCTTCTT 1130884
Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368
| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct 1130885 TTCCCGCTGATTCCGCCAAACCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGG 1130944
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1130945 GACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 1131004
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1131005 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTC 1131064
Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1131065 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1131109
>seq95
Length=13066083
Score = 318 bits (352), Expect = 2e-84
Identities = 286/360 (79%), Gaps = 22/360 (6%)
Strand=Plus/Minus
Query 193 aaaaaaaCGATAAGGGTAGTGGTATTTCACT--TGCGCCGAAACGG-------------- 236
||||||| |||||| |||||||||||||||| | | | | | ||
Sbjct 1619928 AAAAAAATGATAAGAGTAGTGGTATTTCACTACTTCACGGGGATGGAGGGTGCTGGGGGC 1619869
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||| || |||| ||| |||| ||| |||||| | | || |||||||||||||||
Sbjct 1619868 CTCCCACCTACTCTATACCGCTCATGTCTTTTCACTTTGCCAGATTAGAGTCAAGCTCAA 1619809
Query 297 CAGGGTCTTCTTTCCCCGCTG---ATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
||||||||| |||| |||| |||| | |||||| |||||||||||||||||||| |
Sbjct 1619808 CAGGGTCTT---TCCCTGCTGCTTATTCTGGCAAGCCTGTTCCCTTGGCTGTGGTTTCAC 1619752
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
| || ||||| |||||||||||||| || | || | | | |||||| | |||||||||||
Sbjct 1619751 TGGACAGTAGGTAGGGACAGTGGGAGTCGCATTCACCTACTCATGCACATCACTAATTAG 1619692
Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473
||||| ||||||||||||| ||||||||||||| ||||||||| || |||||| || |
Sbjct 1619691 ATGACAAGGCATTTGGCTATATTAAGAGAGTCATGGTTACTCCCACCATTTACCTGCACA 1619632
Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
| ||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1619631 TCATTGTATTTTTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCTACAACA 1619572
>seq343
Length=2751252
Score = 273 bits (302), Expect = 7e-71
Identities = 205/240 (85%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326
||||||| | ||||| |||||| || ||| |||||||||||||||||||||| ||||
Sbjct 2284798 TTCACAATGCTAGACTACAGTCAATCTTAAC--GGTCTTCTTTCCCCGCTGATTCTGCCA 2284855
Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386
||| | || ||||||||||||||| ||| |||||||| | ||||||||||||||| ||
Sbjct 2284856 AGCTCCTTACCTTGGCTGTGGTTTGGCTGGATAGTAGGGAAGGACAGTGGGAATCTTCTT 2284915
Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446
||||||||| |||| |||| |||||||||| |||||||||||||||||||||||||||
Sbjct 2284916 CATCCATTCAGGCGCATCACCAATTAGATGAGAAGGCATTTGGCTACCTTAAGAGAGTCA 2284975
Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506
||||||||| ||| || ||| |||||| |||||||||||||||| |||||||||| ||
Sbjct 2284976 CAGTTACTCCAGCCTTTCACCTGCGCTTTATTGAATTTCTTCACTTGGACATTCAGATCA 2285035
Score = 82.4 bits (90), Expect = 2e-13
Identities = 83/107 (78%), Gaps = 1/107 (1%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTT-CTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|| ||||| || ||| ||| |||| |||| |||| | |||||||||||| ||||
Sbjct 2283361 TTCTGCTCCACCTGAGGTTTTCTGTCCTCCCTGAGCTGGCTTTAGGACACCTGAGTTACC 2283420
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| | ||||||||| ||||||||||||||| || ||||
Sbjct 2283421 GTTTGACAGGCTTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 2283467
>seq38
Length=23493148
Score = 241 bits (266), Expect = 4e-61
Identities = 190/225 (84%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369
|||| |||||| | ||| |||| || ||| ||||||||||| ||| |||| || ||| |
Sbjct 6451912 CCCCACTGATTGCCCCATGCCCTTTTCCTGGGCTGTGGTTTTGCTGGATAATA-ATAAAG 6451970
Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429
||||||| ||||| | ||||||||||| ||||||||||||||| |||||||||||
Sbjct 6451971 ACAGTGGTGATCTCATATATCCATTCATGAATGTCACTAATTAGATGCTGAGGCATTTGG 6452030
Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489
|| ||||||||||||||| |||||||||||| | ||||| |||| |||||||||||||
Sbjct 6452031 CTTCCTTAAGAGAGTCATCGTTACTCCCGCCATGTACCCAGGCTTCATTGAATTTCTTCA 6452090
Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534
||| |||||||||||||||||||||||||| || || ||||||||
Sbjct 6452091 CTTAGACATTCAGAGCACTGGGCAGAAATCCCA-TGAGTCAACAT 6452134
>seq492
Length=966749
Score = 138 bits (152), Expect = 4e-30
Identities = 106/124 (85%), Gaps = 5/124 (4%)
Strand=Plus/Plus
Query 394 TCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTAC 453
||| |||| |||| |||| ||||||||||||||||||||| ||| ||||||||||||
Sbjct 56097 TCAAGCGCATCACCAATTGGATGACGAGGCATTTGGCTACTTTA----AGTCATAGTTAC 56152
Query 454 TCCCGCCGTTTACCCGCGCTTGGTTGAA-TTTCTTCACTTTGACATTCAGAGCACTGGGC 512
| || || |||||| |||||| ||||| ||| ||||||||||| |||||||||||||||
Sbjct 56153 TTCCACCCTTTACCGGCGCTTCATTGAATTTTTTTCACTTTGACTTTCAGAGCACTGGGC 56212
Query 513 AGAA 516
||||
Sbjct 56213 AGAA 56216
>seq10
Length=39035891
Score = 111 bits (122), Expect = 5e-22
Identities = 173/245 (71%), Gaps = 18/245 (7%)
Strand=Plus/Minus
Query 283 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCG--CCAAGCCCGTTCCCTTG 340
|| || ||| ||||||||||||| | ||| ||||| |||||||| || || ||
Sbjct 36903631 AGTGTTAAGTTCAACAGGGTCTT---TGCCCAGTGATTTTATTCCAAGCCCATTGCCCTG 36903575
Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400
||||| |||| || |||| ||| ||||||||||| |||||| || |||||||| ||
Sbjct 36903574 GCTGTAGTTTTACTGGATACTAGGTAGGGACAGTGATAATCTCTTTCATCCATTC-TGGT 36903516
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460
| ||||||||| ||||| ||| | || | ||| |||| |||||| ||||
Sbjct 36903515 CATCACTAATTTGATGATAAGGTACTTTGTTACTTTAAAGGAGTCACTGTTA-------- 36903464
Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT--TCAGAGCACTGGGCAGAAAT 518
|| || | | |||| ||||||||||||| ||| | |||| || ||||| ||
Sbjct 36903463 --TTTCCATCAATGCATTGAGTTTCTTCACTTTGGCATTATAAGAGTACCATGCAGACAT 36903406
Query 519 CACAT 523
|| ||
Sbjct 36903405 CAAAT 36903401
Score = 89.7 bits (98), Expect = 2e-15
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 391 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 450
||||| ||| | ||||||||||||||| |||| ||||| || ||| |||||||| |||
Sbjct 36552271 CATTCTTGCACATCACTAATTAGATGATGAGGAATTTGACTCTTTTAGGAGAGTCACAGT 36552212
Query 451 TACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489
|||||| || ||||| | |||| ||||||||||||
Sbjct 36552211 TACTCCTGCTGTTTATACATGCTTCACTGAATTTCTTCA 36552173
>seq204
Length=5761848
Score = 105 bits (116), Expect = 2e-20
Identities = 73/83 (88%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308
|||||||||||| ||| ||||| | | ||||||||||||||||||||||||||||||
Sbjct 2700626 CTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTT 2700567
Query 309 TCCCCGCTGATTCCGCCAAGCCC 331
||||| |||| ||||||||||||
Sbjct 2700566 TCCCCACTGAGTCCGCCAAGCCC 2700544
>seq90
Length=12282368
Score = 93.3 bits (102), Expect = 1e-16
Identities = 83/100 (83%), Gaps = 3/100 (3%)
Strand=Plus/Minus
Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTC-AT 447
||||||||| | | ||||||||||| ||| ||| |||||||||||||||||||||| ||
Sbjct 6324614 TCCATTCATACACATCACTAATTAGGTGAAGAGA-ATTTGGCTACCTTAAGAGAGTCTAT 6324556
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTT 487
||| |||||| | ||||| | | |||| || ||||||||
Sbjct 6324555 AGTCACTCCCTCTGTTTA-CTGAGCTTCGTCAAATTTCTT 6324517
>seq34
Length=23737259
Score = 80.6 bits (88), Expect = 9e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447
|||| |||| | |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 16681475 TCCAGTCATCTGTGTCACTAATTAGATGATAAGGCATTTGGCTACCTTAAGAGAGTCAT 16681533
>seq20
Length=29555478
Score = 80.6 bits (88), Expect = 9e-13
Identities = 77/99 (78%), Gaps = 6/99 (6%)
Strand=Plus/Plus
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
||||| ||| | ||||||| |||||||||| || || |||||| | || | ||||
Sbjct 276555 GCATTCAGCTCCTTTAAGAGTGTCATAGTTAGATCCACCTTTTACCTGGGCCTCTGTGAA 276614
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
||||||| ||||||||||||||||||||||||||
Sbjct 276615 TTTCTTC------ACATTCAGAGCACTGGGCAGAAATCA 276647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634864784000
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