Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq54 435 1e-119 seq170 405 2e-110 seq95 318 2e-84 seq343 273 7e-71 seq38 241 4e-61 seq492 138 4e-30 seq10 111 5e-22 seq204 105 2e-20 seq90 93.3 1e-16 seq34 80.6 9e-13 seq20 80.6 9e-13 >seq54 Length=18522067 Score = 435 bits (482), Expect = 1e-119 Identities = 276/299 (92%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||| Sbjct 9632051 TCCCACTTATTCTACACCTCTCATGTCTCTTCACGGTGCCAGACTAGAGTCAAGCTCAAC 9631992 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 9631991 AGGCTCTTCTTTCCCCACTGATTCCGCGAAGCCCGTTCCCTTGGCTGTGGTTACGCTGGA 9631932 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 | |||| |||||||||||||||||||||| ||||||||||| | |||||||||||||||| Sbjct 9631931 TTGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGTGTGTCACTAATTAGATGA 9631872 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 9631871 CGAGGCGTTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCAT 9631812 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 9631811 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACACCA 9631753 >seq170 Length=7561184 Score = 405 bits (448), Expect = 2e-110 Identities = 261/285 (92%), Gaps = 9/285 (3%) Strand=Plus/Plus Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308 |||||||||||| ||| ||||| || | ||| ||| ||||||||||||||| Sbjct 1130834 CTACACCTCTCATGTCTCTTCAC-----CGTGCCAGA----AGCGCAACAGGGTCTTCTT 1130884 Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct 1130885 TTCCCGCTGATTCCGCCAAACCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGG 1130944 Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1130945 GACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 1131004 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1131005 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTC 1131064 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1131065 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1131109 >seq95 Length=13066083 Score = 318 bits (352), Expect = 2e-84 Identities = 286/360 (79%), Gaps = 22/360 (6%) Strand=Plus/Minus Query 193 aaaaaaaCGATAAGGGTAGTGGTATTTCACT--TGCGCCGAAACGG-------------- 236 ||||||| |||||| |||||||||||||||| | | | | | || Sbjct 1619928 AAAAAAATGATAAGAGTAGTGGTATTTCACTACTTCACGGGGATGGAGGGTGCTGGGGGC 1619869 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| || |||| ||| |||| ||| |||||| | | || ||||||||||||||| Sbjct 1619868 CTCCCACCTACTCTATACCGCTCATGTCTTTTCACTTTGCCAGATTAGAGTCAAGCTCAA 1619809 Query 297 CAGGGTCTTCTTTCCCCGCTG---ATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 ||||||||| |||| |||| |||| | |||||| |||||||||||||||||||| | Sbjct 1619808 CAGGGTCTT---TCCCTGCTGCTTATTCTGGCAAGCCTGTTCCCTTGGCTGTGGTTTCAC 1619752 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 | || ||||| |||||||||||||| || | || | | | |||||| | ||||||||||| Sbjct 1619751 TGGACAGTAGGTAGGGACAGTGGGAGTCGCATTCACCTACTCATGCACATCACTAATTAG 1619692 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 ||||| ||||||||||||| ||||||||||||| ||||||||| || |||||| || | Sbjct 1619691 ATGACAAGGCATTTGGCTATATTAAGAGAGTCATGGTTACTCCCACCATTTACCTGCACA 1619632 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1619631 TCATTGTATTTTTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCTACAACA 1619572 >seq343 Length=2751252 Score = 273 bits (302), Expect = 7e-71 Identities = 205/240 (85%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 ||||||| | ||||| |||||| || ||| |||||||||||||||||||||| |||| Sbjct 2284798 TTCACAATGCTAGACTACAGTCAATCTTAAC--GGTCTTCTTTCCCCGCTGATTCTGCCA 2284855 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||| | || ||||||||||||||| ||| |||||||| | ||||||||||||||| || Sbjct 2284856 AGCTCCTTACCTTGGCTGTGGTTTGGCTGGATAGTAGGGAAGGACAGTGGGAATCTTCTT 2284915 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446 ||||||||| |||| |||| |||||||||| ||||||||||||||||||||||||||| Sbjct 2284916 CATCCATTCAGGCGCATCACCAATTAGATGAGAAGGCATTTGGCTACCTTAAGAGAGTCA 2284975 Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506 ||||||||| ||| || ||| |||||| |||||||||||||||| |||||||||| || Sbjct 2284976 CAGTTACTCCAGCCTTTCACCTGCGCTTTATTGAATTTCTTCACTTGGACATTCAGATCA 2285035 Score = 82.4 bits (90), Expect = 2e-13 Identities = 83/107 (78%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTT-CTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 || ||||| || ||| ||| |||| |||| |||| | |||||||||||| |||| Sbjct 2283361 TTCTGCTCCACCTGAGGTTTTCTGTCCTCCCTGAGCTGGCTTTAGGACACCTGAGTTACC 2283420 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| | ||||||||| ||||||||||||||| || |||| Sbjct 2283421 GTTTGACAGGCTTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 2283467 >seq38 Length=23493148 Score = 241 bits (266), Expect = 4e-61 Identities = 190/225 (84%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369 |||| |||||| | ||| |||| || ||| ||||||||||| ||| |||| || ||| | Sbjct 6451912 CCCCACTGATTGCCCCATGCCCTTTTCCTGGGCTGTGGTTTTGCTGGATAATA-ATAAAG 6451970 Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429 ||||||| ||||| | ||||||||||| ||||||||||||||| ||||||||||| Sbjct 6451971 ACAGTGGTGATCTCATATATCCATTCATGAATGTCACTAATTAGATGCTGAGGCATTTGG 6452030 Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 || ||||||||||||||| |||||||||||| | ||||| |||| ||||||||||||| Sbjct 6452031 CTTCCTTAAGAGAGTCATCGTTACTCCCGCCATGTACCCAGGCTTCATTGAATTTCTTCA 6452090 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 ||| |||||||||||||||||||||||||| || || |||||||| Sbjct 6452091 CTTAGACATTCAGAGCACTGGGCAGAAATCCCA-TGAGTCAACAT 6452134 >seq492 Length=966749 Score = 138 bits (152), Expect = 4e-30 Identities = 106/124 (85%), Gaps = 5/124 (4%) Strand=Plus/Plus Query 394 TCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTAC 453 ||| |||| |||| |||| ||||||||||||||||||||| ||| |||||||||||| Sbjct 56097 TCAAGCGCATCACCAATTGGATGACGAGGCATTTGGCTACTTTA----AGTCATAGTTAC 56152 Query 454 TCCCGCCGTTTACCCGCGCTTGGTTGAA-TTTCTTCACTTTGACATTCAGAGCACTGGGC 512 | || || |||||| |||||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct 56153 TTCCACCCTTTACCGGCGCTTCATTGAATTTTTTTCACTTTGACTTTCAGAGCACTGGGC 56212 Query 513 AGAA 516 |||| Sbjct 56213 AGAA 56216 >seq10 Length=39035891 Score = 111 bits (122), Expect = 5e-22 Identities = 173/245 (71%), Gaps = 18/245 (7%) Strand=Plus/Minus Query 283 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCG--CCAAGCCCGTTCCCTTG 340 || || ||| ||||||||||||| | ||| ||||| |||||||| || || || Sbjct 36903631 AGTGTTAAGTTCAACAGGGTCTT---TGCCCAGTGATTTTATTCCAAGCCCATTGCCCTG 36903575 Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 ||||| |||| || |||| ||| ||||||||||| |||||| || |||||||| || Sbjct 36903574 GCTGTAGTTTTACTGGATACTAGGTAGGGACAGTGATAATCTCTTTCATCCATTC-TGGT 36903516 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 | ||||||||| ||||| ||| | || | ||| |||| |||||| |||| Sbjct 36903515 CATCACTAATTTGATGATAAGGTACTTTGTTACTTTAAAGGAGTCACTGTTA-------- 36903464 Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT--TCAGAGCACTGGGCAGAAAT 518 || || | | |||| ||||||||||||| ||| | |||| || ||||| || Sbjct 36903463 --TTTCCATCAATGCATTGAGTTTCTTCACTTTGGCATTATAAGAGTACCATGCAGACAT 36903406 Query 519 CACAT 523 || || Sbjct 36903405 CAAAT 36903401 Score = 89.7 bits (98), Expect = 2e-15 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 391 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 450 ||||| ||| | ||||||||||||||| |||| ||||| || ||| |||||||| ||| Sbjct 36552271 CATTCTTGCACATCACTAATTAGATGATGAGGAATTTGACTCTTTTAGGAGAGTCACAGT 36552212 Query 451 TACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 |||||| || ||||| | |||| |||||||||||| Sbjct 36552211 TACTCCTGCTGTTTATACATGCTTCACTGAATTTCTTCA 36552173 >seq204 Length=5761848 Score = 105 bits (116), Expect = 2e-20 Identities = 73/83 (88%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308 |||||||||||| ||| ||||| | | |||||||||||||||||||||||||||||| Sbjct 2700626 CTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTT 2700567 Query 309 TCCCCGCTGATTCCGCCAAGCCC 331 ||||| |||| |||||||||||| Sbjct 2700566 TCCCCACTGAGTCCGCCAAGCCC 2700544 >seq90 Length=12282368 Score = 93.3 bits (102), Expect = 1e-16 Identities = 83/100 (83%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTC-AT 447 ||||||||| | | ||||||||||| ||| ||| |||||||||||||||||||||| || Sbjct 6324614 TCCATTCATACACATCACTAATTAGGTGAAGAGA-ATTTGGCTACCTTAAGAGAGTCTAT 6324556 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTT 487 ||| |||||| | ||||| | | |||| || |||||||| Sbjct 6324555 AGTCACTCCCTCTGTTTA-CTGAGCTTCGTCAAATTTCTT 6324517 >seq34 Length=23737259 Score = 80.6 bits (88), Expect = 9e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 |||| |||| | |||||||||||||||| |||||||||||||||||||||||||||| Sbjct 16681475 TCCAGTCATCTGTGTCACTAATTAGATGATAAGGCATTTGGCTACCTTAAGAGAGTCAT 16681533 >seq20 Length=29555478 Score = 80.6 bits (88), Expect = 9e-13 Identities = 77/99 (78%), Gaps = 6/99 (6%) Strand=Plus/Plus Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 ||||| ||| | ||||||| |||||||||| || || |||||| | || | |||| Sbjct 276555 GCATTCAGCTCCTTTAAGAGTGTCATAGTTAGATCCACCTTTTACCTGGGCCTCTGTGAA 276614 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||| |||||||||||||||||||||||||| Sbjct 276615 TTTCTTC------ACATTCAGAGCACTGGGCAGAAATCA 276647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634864784000