Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq113 185 3e-44
seq126 163 9e-38
seq205 154 4e-35
seq17 140 1e-30
seq34 129 2e-27
seq80 118 3e-24
seq172 104 7e-20
seq8 104 7e-20
seq64 95.1 4e-17
seq88 80.6 8e-13
>seq113
Length=11149966
Score = 185 bits (204), Expect = 3e-44
Identities = 151/182 (83%), Gaps = 1/182 (1%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || |||||| ||||||| ||||| |||| ||||||||
Sbjct 10028981 ACTCATTCCAATTACAGGGCCTTGAAAGAGTCCTGTATTGTTATTTTTTGTTACTACCTC 10029040
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|||| ||| ||| ||||||||||||||| |||||||||||||||||||| |||| | |||
Sbjct 10029041 CCCGGGTCAGGAGTGGGTAATTTGCGCGACTGCTGCCTTCCTTGGATGTTGTAGACATTT 10029100
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
| ||||||||||||| ||| || |||||| ||||||| | |||| | |||||||||
Sbjct 10029101 CGCAGGCTCCCTCTCTGGACTCAAACCCTGATTCCCCATCACCCAAGGTCACCATGGTAA 10029160
Query 182 GC 183
||
Sbjct 10029161 GC 10029162
>seq126
Length=9965562
Score = 163 bits (180), Expect = 9e-38
Identities = 116/132 (88%), Gaps = 1/132 (1%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 7378343 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 7378284
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|||| ||||||| |||||||||||| ||||||||||||| ||| ||||||||||| ||||
Sbjct 7378283 CCCGGGTCGGGAGTGGGTAATTTGCACGCCTGCTGCCTTTCTTTGATGTGGTAGCGGTTT 7378224
Query 122 CTCAGGCTCCCT 133
||||||||||||
Sbjct 7378223 CTCAGGCTCCCT 7378212
>seq205
Length=6054944
Score = 154 bits (170), Expect = 4e-35
Identities = 168/219 (77%), Gaps = 13/219 (6%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | | ||||||| ||||||| |||| || | |||||||
Sbjct 3763978 ACTCATTCCAATTACATGGTCTCAAAAGAATCCTGTAT---TATTACTTTCCGCTACCTC 3763922
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| ||| || |||||||||||| ||||||||||||||||||||||||||| | |||
Sbjct 3763921 CCAA-GTCATGAGTGGGTAATTTGCATGCCTGCTGCCTTCCTTGGATGTGGTAGTCATTT 3763863
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|||||| ||||||| ||||| ||||||| ||| | | | |||| | | || |||||||
Sbjct 3763862 CTCAGGTGCCCTCTCTGGAATTGAACCCTGATTTCTCATCACCCATGGTCACAATGGTAG 3763803
Query 182 GCCACTAT----CCTACCATCGAAAGTTGATAGGGCAGA 216
||| || | ||| |||||||||||||||||
Sbjct 3763802 ----ATATGGTGACTGCTATCAAAAGTTGATAGGGCAGA 3763768
Score = 80.6 bits (88), Expect = 8e-13
Identities = 86/109 (79%), Gaps = 6/109 (6%)
Strand=Plus/Minus
Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATAC 455
|| |||| | ||||||||||||||| |||| |||||||||||||| | ||| || |
Sbjct 3763314 AACAAACAACAACTGATTTAATGAGACATTTGCAGTTTCACTGTACTCCTGTGCGTAAA- 3763256
Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||| || || ||||||||| |||||||||| | || ||||||||
Sbjct 3763255 -GAGACA--CAAGGGTTAATCTTTAAGACAAGCATGT-ACCACTGGCAG 3763211
>seq17
Length=32810362
Score = 140 bits (154), Expect = 1e-30
Identities = 133/166 (80%), Gaps = 7/166 (4%)
Strand=Plus/Plus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAAATAAAC 403
||||||||||||||||| ||||||| |||||||| | || | ||| || | |||| |||
Sbjct 3343487 CATGTATTAGCTCTAGAGTTACCACAGTTATCCAAGGAGAAGAGGAACCAGCAAACAAAG 3343546
Query 404 GA----TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTA 458
|| |||||||||||||||||||||| |||||||| ||| || || | || ||
Sbjct 3343547 GAATCATAACTGATTTAATGAGCCATTCACAGTTTCAAGGTACCAGCCTGTGTGTAATTT 3343606
Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|| ||||||||||| |||||||| |||||||||| ||| ||||||
Sbjct 3343607 GAGATGCATGGCTTCATCTTTGATGCAAGCATATG-CTATTGGCAG 3343651
Score = 100 bits (110), Expect = 9e-19
Identities = 119/157 (76%), Gaps = 6/157 (4%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
||| || |||| || | | || ||||| || |||||| ||| ||| ||||||||
Sbjct 22854081 ACTGATGCCAAATAAATGGCCTCAAAAAAGTTCTGTATTGTTATC-ATT---ACTACCTC 22854026
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
||| ||| ||| ||||||||| | |||| |||| ||||| |||||| ||| | |||
Sbjct 22854025 CCCAGGTCAGGAGTGGGTAATTCTTGTACCTGTTGCCATCCTTTGATGTGCTAGTCATTT 22853966
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCC 158
|||||||||||| ||| ||||| ||| || |||||||
Sbjct 22853965 CTCAGGCTCCCTTTCCAGAATC-AACTCTGATTCCCC 22853930
>seq34
Length=23737259
Score = 129 bits (142), Expect = 2e-27
Identities = 131/169 (78%), Gaps = 20/169 (12%)
Strand=Plus/Plus
Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTAT----C 395
|| |||||||| | | ||||||||||||| |||||||| |||| | ||| || | |
Sbjct 925926 TTGGCATGTATCACCCCTAGAATTACCACAGTTATCCAAGTAGGACAGGAACAAGTGACC 925985
Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455
||| ||| ||||||||||||||||||||||| ||||| ||||||| | |||
Sbjct 925986 AAAGGAACCATAACTGATTTAATGAGCCATTCACAGTTCCACTGTACCG---GCT----- 926037
Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||| ||||||||||
Sbjct 926038 ------GTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 926079
>seq80
Length=13770986
Score = 118 bits (130), Expect = 3e-24
Identities = 108/133 (81%), Gaps = 5/133 (4%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACCCA---AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||| | || ||||||||| |||| ||||| | | |||||
Sbjct 1074107 ACTCATTCCAATTACAGGGCCTCGAGAAAGAGCCC-GTATTGTTATTTTTCATTACTACT 1074165
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||| || ||||||| ||||||||||| || |||| |||||||||||||||||||||| ||
Sbjct 1074166 TCCACG-GTCGGGAGTGGGTAATTTGTGCACCTGTTGCCTTCCTTGGATGTGGTAGCTGT 1074224
Query 120 TTCTCAGGCTCCC 132
||||| |||| ||
Sbjct 1074225 TTCTCTGGCTACC 1074237
>seq172
Length=7263250
Score = 104 bits (114), Expect = 7e-20
Identities = 80/90 (89%), Gaps = 5/90 (6%)
Strand=Plus/Plus
Query 417 ATGAGCCATTCGCAGTTTCACTGTA-TAGAT-TGCTTATACTTAGACATGCATGGCTTAA 474
|||||||||| |||||||||||||| || | ||| |||||||||||||||||||||||
Sbjct 4952063 ATGAGCCATTTGCAGTTTCACTGTACCAGCTGTGC--ATACTTAGACATGCATGGCTTAA 4952120
Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||| || | ||||||||||
Sbjct 4952121 TCTTTGAGACAAGCCTACG-CTACTGGCAG 4952149
>seq8
Length=38990876
Score = 104 bits (114), Expect = 7e-20
Identities = 127/169 (75%), Gaps = 16/169 (9%)
Strand=Plus/Plus
Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAA---- 397
||| |||| |||||||||||||||||| ||| || |||| | ||| | | |||
Sbjct 17279905 AGCGTGTACTAGCTCTAGAATTACCACAATTACACAAGTAGGAGAGGAGCAAGCAACCAT 17279964
Query 398 --ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455
| |||| |||||||||||| ||| ||| | || | ||||| |||| | |
Sbjct 17279965 AAAGAAACCATAACTGATTTAGTGACCCACTGT--GTGTACCTGTAG----TGCTCA--C 17280016
Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||| | |||||||||||||||||||||||| ||||||||||
Sbjct 17280017 TTAGACATGCAAGACTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 17280064
>seq64
Length=17089795
Score = 95.1 bits (104), Expect = 4e-17
Identities = 79/97 (81%), Gaps = 5/97 (5%)
Strand=Plus/Plus
Query 68 TCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGG 127
|| ||| |||||||||||| | |||||||| |||||||||||||||||| |||||||||
Sbjct 14543652 TCAGGAGTGGGTAATTTGCATGTCTGCTGCCCTCCTTGGATGTGGTAGCCATTTCTCAGG 14543711
Query 128 CTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACC 164
|| ||||||| ||||| | ||||||| | |||
Sbjct 14543712 CTTCCTCTCC-----AGAACCATGATTCCCCATCACC 14543743
>seq88
Length=13306769
Score = 80.6 bits (88), Expect = 8e-13
Identities = 121/169 (72%), Gaps = 6/169 (4%)
Strand=Plus/Plus
Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA----AGGTACT-ATC 395
|| ||||||||||| |||||||||| | ||||||||||||| | || || | |
Sbjct 742521 TTGGCATGTATTAGTTCTAGAATTATCGTAGTTATCCATGTAGGAGGAGAGCAGCTGACC 742580
Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455
||| |||| ||||||| ||||| || | || || ||||| | || | |||
Sbjct 742581 AAAGAAACCCTAACTGACTTAATTAGTCTTTAACA-TTTCATTTTACTTACCATAAATAT 742639
Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||| |||||| || ||| ||||||||||||| | ||| |||
Sbjct 742640 TTAGACATTGATGGCTCAACATTTTAGACAAGCATATGTCCCCTGTCAG 742688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510090368000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |