Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq6 111 3e-22 seq8 77.0 6e-12 >seq6 Length=85730050 Score = 111 bits (122), Expect = 3e-22 Identities = 181/256 (71%), Gaps = 6/256 (2%) Strand=Plus/Plus Query 49 CTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG 107 ||| | || || || ||||| | | |||||||||||||| ||||| ||||||||||||| Sbjct 42209540 CTGAGAGTCCCTGGAGGCCAGAAGCATTTACTTTGAAAAACTTAGA-TGTTCAAAGCAGG 42209598 Query 108 CCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG 164 || ||| | | |||| | | |||||||| || |||||| |||||||| ||||| Sbjct 42209599 CCCATGCCCCCTGGATACCACAACTAGGAATAATGGAGTAGGACC-GCGGTTCTGTTTTG 42209657 Query 165 TTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATT 224 ||||||| || || | | |||||||| ||||| || |||||| | |||| | Sbjct 42209658 TTGGTTTTCAGAACTGTGGCCATGATTAAGAGGGACAGCAGGGGGTATTCTTATTGCACC 42209717 Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 | |||||||| ||| || || | || || | | ||| || || |||| Sbjct 42209718 GCTAGAGGTGAGATTGTTAGACCAGAACATGAAGGACCAGAGTGAAGGCATTTGACAAGA 42209777 Query 285 ATGTTTTCATTAATCA 300 |||||||||||||||| Sbjct 42209778 ATGTTTTCATTAATCA 42209793 >seq8 Length=79101790 Score = 77.0 bits (84), Expect = 6e-12 Identities = 127/183 (69%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 |||||||| ||||||||| | | ||||||||||| | || | | ||||| Sbjct 24875444 GGAATAATGGAATAGGACTTTGG-------TTTGTTGGTTTTCGGAACTGAGGCCATGAT 24875496 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| | | ||||| | ||||| | | |||||||||||||||| | | Sbjct 24875497 TAAGAGGGACGGCCAGGGGTATTCGTATTGTGCCGCTATAGGTGAAATTCTTGGACTGAC 24875556 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| || | ||| ||||| || ||||| ||||||| ||| |||| ||| ||| Sbjct 24875557 ACAAGACGGACCAGTGCAAAAGCATTTTCCAAGAATGTTTTTATTCATCA-AGAAATAAA 24875615 Query 311 GTT 313 ||| Sbjct 24875616 GTT 24875618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915123104896