Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq45 149 3e-33 seq1 131 7e-28 seq19 113 2e-22 seq12 105 3e-20 seq83 89.7 2e-15 seq66 84.2 9e-14 >seq45 Length=17893317 Score = 149 bits (164), Expect = 3e-33 Identities = 105/120 (88%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 930685 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 930744 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 930745 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCTGACCTGGGTATAGGGGCGA 930804 >seq1 Length=111700974 Score = 131 bits (144), Expect = 7e-28 Identities = 93/107 (87%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 577 AAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCA 636 |||||||||||||||||||| |||| |||||||||||||||||||||||||| || | Sbjct 11489775 AAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTA 11489716 Query 637 GCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 11489715 GCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 11489669 >seq19 Length=49175038 Score = 113 bits (124), Expect = 2e-22 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| || ||| ||||||||||||||||||||| |||| |||||||||||||||||| Sbjct 32036653 TGTTAGGGCCCAAAAGATGGTGAACTATGCCTGTGCAGGGCAAAGCCAGAGGAAACTCTG 32036594 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| | ||||| ||| ||||||||||| || || | |||||| ||| |||| Sbjct 32036593 GTGGAGGTCCATTGCGGTCCTGACGTGCAAATCGGTCATCCAGCCTGGGTACAGGAGCGA 32036534 >seq12 Length=64696486 Score = 105 bits (116), Expect = 3e-20 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||| ||||||||||||||||||||||| |||| ||||||||| |||||||| Sbjct 63303904 TGTTAGGACTCGAAAGATGGTGAACTATGCCTGGGCAGGGCAAAGCCAGAGTAAACTCTG 63303963 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||||||| | ||| || ||| ||||||| | || || | ||||||||||||| Sbjct 63303964 GTGGAGGTCCATAGCAGTCCTGATGTGCAAACCAGTCATCTGACCTGGGTATAGGGGC 63304021 >seq83 Length=8071411 Score = 89.7 bits (98), Expect = 2e-15 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||| |||||||||||||||||||| ||||||| ||| ||||||| ||||||| || Sbjct 4592603 CTGTTAGGACCCGAAAGATGGTGAACGATGCCTGGGCAGGCTGAAGCCGGAGGAAAGGCT 4592662 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 | |||||| | ||| || ||| ||| |||| || | ||| | || || Sbjct 4592663 GATGGAGGTCCAGAGCAGTCCTGACGTACAAACCGGTGGTCGACTTGGG 4592711 >seq66 Length=11165665 Score = 84.2 bits (92), Expect = 9e-14 Identities = 87/112 (78%), Gaps = 3/112 (3%) Strand=Plus/Minus Query 572 CCCGAAAGATGGTGAACTATGC--CTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 || ||||||||||||||||| ||| || | ||||||||||||| ||||||||||| Sbjct 885172 CCTGAAAGATGGTGAACTATATTTCTGGGCAGAGCGAAGCCAGAGGAAGCTCTGGTGGAG 885113 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 | || |||||| ||| ||||||||| || || | |||| |||||||| Sbjct 885112 AC-CGTAGCGGTCCTGATGTGCAAATCAGTCATCCTACCTGGGCATAGGGGC 885062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079819777100