Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq8 143 4e-32 seq27 127 3e-27 seq9 125 1e-26 seq37 118 2e-24 seq67 98.7 2e-18 seq6 91.5 2e-16 seq82 89.7 8e-16 seq58 82.4 1e-13 >seq8 Length=79101790 Score = 143 bits (158), Expect = 4e-32 Identities = 103/118 (87%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||| |||| |||||||||||||||||||||||| |||||| Sbjct 32855915 CTAGTTAGCATGCCA--GTCTGGTTCCTTATCGGAATTAACCAGACAAATCGCTCCACTT 32855858 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCC 259 |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct 32855857 ACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAGTCTGTCC 32855800 >seq27 Length=37910919 Score = 127 bits (140), Expect = 3e-27 Identities = 178/245 (73%), Gaps = 15/245 (6%) Strand=Plus/Plus Query 30 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGC 89 |||| ||| | |||||||||||||||| ||| ||| | ||| |||| || | |||| Sbjct 7621195 GTGCAACCCTGGACATCTAAGGGCATCATAGATCTGCTTTTGA-TCAATCT-CGGGTGGC 7621252 Query 90 TGGAAGCCAATAGTCCCTCTAAGAAGCCAGC--------CACCAACCA--TAGTCG--AT 137 || | |||| | |||||| |||||| || ||||||||| | | | || Sbjct 7621253 TGAATGCCACTCAGCCCTCTGAGAAGCTAGGGAGGGGGACACCAACCACTTGGGGGTCAT 7621312 Query 138 GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCC 197 | ||| |||||| | | ||||| || ||||||||||||||| ||||||| |||| | Sbjct 7621313 GTAACTAGTTAGCATGGCAGAGTCTCATTTGTTATCGGAATTAACTAGACAAACCACTTC 7621372 Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 | ||| ||| ||||||||||| || |||| | |||| | ||||||| |||||||||| Sbjct 7621373 CTCGGCTACGAATGGCCATGCACCCCCCCCCACAAAATCGA-AAAGAGCCATCAATCTGT 7621431 Query 258 CCTCC 262 || || Sbjct 7621432 CCACC 7621436 >seq9 Length=72894145 Score = 125 bits (138), Expect = 1e-26 Identities = 185/260 (71%), Gaps = 23/260 (9%) Strand=Plus/Minus Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 78 ||||||| | |||| | || | |||||||||| ||||||||||||||||||| |||| Sbjct 12307782 GTGTAGCACTAGTGCAGTCCTGGACATCTAAGGTGATCACAGACCTGTTATTGC-TCAAT 12307724 Query 79 CTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC--AGCCAC-----------CA 125 || || || ||| | ||| | ||||| | |||||| || || || Sbjct 12307723 CT-CCGGTGACTGAACACCACTTGTCCCGCCAAGAAGTTGGAGGGACTTCTTGGGGGGCA 12307665 Query 126 ACCATAGTCGATGGGGC-------TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 | | | ||||| || || ||| | | |||||||| |||| |||| Sbjct 12307664 CCGACTGCTTGCGGGGCGCGTAACTAGTTTGCATGCCAGATCCTCGTTCGATATCAGAAT 12307605 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 || ||||||||||| ||||||||||||||||| ||||| |||||||| ||| |||||| Sbjct 12307604 TA-CCAGACAAATCGCTCCACCAACTAAGAACAGCCATTCACCACCAGCCACGGAATCAG 12307546 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||| |||||||||||| Sbjct 12307545 GAAAGAGTTATCAATCTGTC 12307526 Score = 93.3 bits (102), Expect = 7e-17 Identities = 71/83 (86%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||||| || |||| |||||||||||||||||| |||||||| Sbjct 46912112 CTAGTTAGCATGCCA--GTCTCGATCATTATTAGAATTAACCAGACAAATCGCTCCACCA 46912169 Query 202 ACTAAGAACGGCCATGCACCACC 224 ||||||||| ||||||||||||| Sbjct 46912170 ACTAAGAACAGCCATGCACCACC 46912192 >seq37 Length=21497228 Score = 118 bits (130), Expect = 2e-24 Identities = 85/98 (87%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| ||| |||||||||| ||||||||||||||||||||||| | ||||||| ||||| Sbjct 8661477 GTCTTGTTTGTTATCGGAAGTAACCAGACAAATCACTCCACCATCGAAGAACGACCATGT 8661536 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 ||||||||||| ||||||||||| || |||| | ||| Sbjct 8661537 ACCACCACCCACAGAATCAAGAAGGAATTATCCACCTG 8661574 >seq67 Length=11082073 Score = 98.7 bits (108), Expect = 2e-18 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||| | ||||| || |||| |||||||||||||||||||||||||||||| || Sbjct 6898564 GTCAGTGTGGTGCGCGGGCAGCCCCAGACATCTAAGGGCATCACAGACCTGTTATTG-CT 6898506 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| ||| |||||| | |||| | |||||||||||||| Sbjct 6898505 CAATCTT-GGCTGGCTGAATGCCACTTGTCCCTCTAAGAAG 6898466 >seq6 Length=85730050 Score = 91.5 bits (100), Expect = 2e-16 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 |||||||| ||| || |||||| || |||| |||| ||||||||| |||||| |||||| Sbjct 78324894 AGACAAATTGCTCTACTAACTAAAAATGGCCCTGCATCACCACCCACAGAATCGAGAAAG 78324835 Query 244 AGCTATCAATCTGTC 258 ||||||||||||||| Sbjct 78324834 AGCTATCAATCTGTC 78324820 >seq82 Length=8180482 Score = 89.7 bits (98), Expect = 8e-16 Identities = 73/86 (85%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 30 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGC 89 |||| |||| | |||||||||||||||||||||||||||||| ||||| | || |||| Sbjct 7002265 GTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATC-TCGGGTGGC 7002322 Query 90 TGGAAGCCAATAGTCCCTCTAAGAAG 115 || | |||| | |||||||||||||| Sbjct 7002323 TGAACGCCACTTGTCCCTCTAAGAAG 7002348 >seq58 Length=12516702 Score = 82.4 bits (90), Expect = 1e-13 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||| ||||||||||||||||||||||||||||| |||||||| Sbjct 10288603 CTAGTTAGCATGCCAGAGTCTTGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 10288544 Query 202 ACTAA 206 ||||| Sbjct 10288543 ACTAA 10288539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796735144962