Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8 255 1e-65 seq11 176 8e-42 seq6 168 1e-39 seq26 167 4e-39 seq7 161 2e-37 seq122 116 6e-24 seq5 111 3e-22 seq277 98.7 2e-18 seq7489 82.4 1e-13 seq261 80.6 5e-13 >seq8 Length=79101790 Score = 255 bits (282), Expect = 1e-65 Identities = 207/254 (81%), Gaps = 20/254 (8%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 22714573 TACTGAGCAGGATTACCATGGCAACAACATATCATCAGTAGGGTAAAACTAACCTGTCTC 22714514 Query 60 ATGACGGTCTAAACCCAGCTC-------------------ACGTTCCCTATTAGTGGGTG 100 |||| ||||||| |||||||| | |||||||||||||||||| Sbjct 22714513 ATGATGGTCTAAGCCCAGCTCGATGGTCTAAGCCCAGCTCATGTTCCCTATTAGTGGGTG 22714454 Query 101 AACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGA 160 |||||||||| |||| | ||||||||| ||||||||||||||||| ||||||||| Sbjct 22714453 AACAATCCAATGCTTGGTTAGTTCTGCTTCACAATGATAGGAAGAGCCGATATCGAAGGA 22714394 Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220 |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 22714393 TCAAAAAGTGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAAC 22714334 Query 221 TTTTCTGGCACCTC 234 ||||||| |||||| Sbjct 22714333 TTTTCTGACACCTC 22714320 >seq11 Length=65385231 Score = 176 bits (194), Expect = 8e-42 Identities = 128/147 (87%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| | |||||||| | | || |||||||||||||||||||||||||||||| Sbjct 52749433 TACTGAGCAGGATTACCATGGCAACAACA-TCATCAGTAGGGTAAAACTAACCTGTCTCA 52749375 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 52749374 CGACAGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAATGCTTGGTGA 52749315 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGC 147 |||||||||| |||||||||||||| Sbjct 52749314 ATTCTGCTTCACAATGATAGGAAGAGC 52749288 >seq6 Length=85730050 Score = 168 bits (186), Expect = 1e-39 Identities = 125/145 (86%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 79 TCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGAT 138 |||| || | |||||||||||||||||| | ||||| |||||||||||| ||||| Sbjct 73753565 TCACTTTGACAATTAGTGGGTGAACAATC-AGCGCTTGGTGAATTCTGCTTCACAATGAT 73753507 Query 139 AGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 198 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || Sbjct 73753506 AGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCTCAGCA 73753447 Query 199 AGCCAGTTATCCCTGTGGTAACTTT 223 || |||||| |||||||||||| || Sbjct 73753446 AGGCAGTTACCCCTGTGGTAACCTT 73753422 >seq26 Length=39178583 Score = 167 bits (184), Expect = 4e-39 Identities = 155/194 (80%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||| |||| || ||| | || || | ||||| | |||||||||||||| | | Sbjct 2311453 TCATCAGTAGAGTAACACAAAC-TCTCACACTATGGTCTGATCCCAGCTCACGTTCTCCA 2311511 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| | Sbjct 2311512 CTAGTGGGTGAACAATCCAATGCTTGGTGAATTCTGCTTTACAATGATAGGAAGAGCCTA 2311571 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 | || |||| |||||| ||| | |||||| | |||||| |||||||||||||| || Sbjct 2311572 AACTGACGGATGAAAAAGTGACGAC-TTATGAATGTTTGGCTACCACAAGCCAGTTACCC 2311630 Query 211 CTGTGGTAACTTTT 224 |||||||||||| Sbjct 2311631 AGGTGGTAACTTTT 2311644 >seq7 Length=79510297 Score = 161 bits (178), Expect = 2e-37 Identities = 125/149 (84%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 ||||||||||||||||||||||||| | || |||||||||||||||| |||||||||||| Sbjct 44069295 AGCCGACATCGAAGGATCAAAAAGCGATGTTGCTATGAACGCTTGGCCGCCACAAGCCAG 44069354 Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 ||||||||||||||||||||||| |||||| || | | | | | || | ||||||| Sbjct 44069355 TTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAACACCCCAAAGGTCAGAAGGATC 44069414 Query 265 GATAGGCCACACTTTCATGGTTTGTATTC 293 | ||||| ||| |||| ||| ||||||| Sbjct 44069415 GTGAGGCCCCACCTTCACGGTCTGTATTC 44069443 >seq122 Length=3028383 Score = 116 bits (128), Expect = 6e-24 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||| ||||||| |||||| || ||| ||||||| |||||| ||||||||||||| Sbjct 199032 CCGACATTGAAGGATTAAAAAGTAATGTCCCTATGAAGGCTTGGGCACCACAAGCCAGTT 199091 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||| ||| ||| || || | ||| | || | |||||||| Sbjct 199092 ATCCCTGTGGTAACTCTTCCAACACTTCCTGCTTAAAACCCAAAAGGTCAGAAGGATCGT 199151 Query 267 TAGGCCACACTTTCATGGTTTGTATTC 293 ||| | | |||||||||| ||||||| Sbjct 199152 GAGGTCCCGCTTTCATGGTCTGTATTC 199178 >seq5 Length=88520344 Score = 111 bits (122), Expect = 3e-22 Identities = 121/159 (76%), Gaps = 5/159 (3%) Strand=Plus/Minus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||||||||| || | |||| |||||| ||||||| ||| ||||| |||| | || || Sbjct 24470371 ATGATAGGAAAAGTCAACATTGAAGGACCAAAAAGTAACATCGCTGTGAATGTTTTCCTA 24470312 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGG 253 |||||||||| |||| |||||||||||||||||| |||||| | | ||| || | Sbjct 24470311 CCACAAGCCAATTATTCCTGTGGTAACTTTTCTGACACCTCCTACTTAAAA----GA-AG 24470257 Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | ||||| ||||| ||| |||| |||||||||| Sbjct 24470256 TCAGAAGGAAAACGAGGCCCCACATTCAGGGTTTGTATT 24470218 >seq277 Length=69274 Score = 98.7 bits (108), Expect = 2e-18 Identities = 112/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 || ||| ||||||| ||||| | |||| |||||||||||| ||||||||||||| Sbjct 9717 CCAACACTGAAGGATTAAAAAATGATGTCGTTATGAACGCTTGAGCACCACAAGCCAGTT 9658 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC-GAGGGACTAAAGGATCG 265 ||||||||| ||||||||| |||||| | || |||| | | || | ||||||| Sbjct 9657 ATCCCTGTGCTAACTTTTCCATCACCTCCTG-CTTAAATCCCAAAAGGTCAGAAGGATCA 9599 Query 266 ATAGGCCACACTTTCATGGTTTGTATTC 293 ||| | |||||||| ||| ||||||| Sbjct 9598 TGAGGTCCCACTTTCACGGTCTGTATTC 9571 >seq7489 Length=1138 Score = 82.4 bits (90), Expect = 1e-13 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||| |||| || ||||| || || ||| |||| |||||| ||||||||||||| Sbjct 1025 CCGACATTGAAGAATGAAAAATTGACATCACTAAGAACACTTGGCCACCACAAGCCAGTT 1084 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTC 234 ||||||||| ||||| ||| |||| || Sbjct 1085 ATCCCTGTGCTAACTATTCCAGCACTTC 1112 >seq261 Length=89863 Score = 80.6 bits (88), Expect = 5e-13 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 || |||| |||||| |||||| || || |||||||| |||||| |||||||||||| Sbjct 27877 CCAACATTGAAGGAGTAAAAAGTGACATCACTATGAACACTTGGCCATCACAAGCCAGTT 27818 Query 207 ATCCCTGTGGTAACTTTTC 225 ||||||||| ||||| ||| Sbjct 27817 ATCCCTGTGCTAACTATTC 27799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854328213312