Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq9 93.3 8e-17 seq67 86.0 1e-14 seq82 73.4 7e-11 >seq9 Length=72894145 Score = 93.3 bits (102), Expect = 8e-17 Identities = 156/222 (70%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||| |||||||||| | || | |||| | ||||| Sbjct 12307722 AGATTGAG-CAATAACAGGTCTGTGATCACCTTAGATGTCCAGGACTGCACTAGTGCTAC 12307780 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 || || | || | || | ||| | | ||| ||||| | | || | Sbjct 12307781 ACCTACTGGCTCAGCATGTGTCT-ACC-----CCGCAGGCGCAGGTAACCCGTTGAACCC 12307834 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCT-TCAACGAGGAATGCCTAGTAA 284 | | ||| ||||||| | | |||||||| ||| | | | |||||||||| || |||| Sbjct 12307835 CACTTGTGATGGGGATCGGGGATTGCAATGATTCCCCCATGAACGAGGAATTCCCTGTAA 12307894 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326 | | | ||||| ||| ||| |||||| |||||||||||||| Sbjct 12307895 GTGGGGGTCATAAGCTTGCGCTGATTAAGTCCCTGCCCTTTG 12307936 >seq67 Length=11082073 Score = 86.0 bits (94), Expect = 1e-14 Identities = 82/101 (81%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | ||| ||||| |||||||||||||||| Sbjct 6898466 CTTCTTAGAGGGACAAGTGGCATTCAGCC-AGCCAAGATTGAG-CAATAACAGGTCTGTG 6898523 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||| |||| || ||||| | |||||||| Sbjct 6898524 ATGCCCTTAGATGTCTGGGGCTGCCCGCGCACCACACTGAC 6898564 >seq82 Length=8180482 Score = 73.4 bits (80), Expect = 7e-11 Identities = 70/86 (81%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 7002348 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 7002291 Query 131 ATGCCCTTAGATGTTCTGGGCCGCAC 156 |||||||||||||| | |||| |||| Sbjct 7002290 ATGCCCTTAGATGTCCGGGGCTGCAC 7002265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947120416256