Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq51 224 8e-54 seq92 168 5e-37 seq25 168 5e-37 seq35 111 1e-19 seq3 98.7 8e-16 >seq51 Length=16359109 Score = 224 bits (248), Expect = 8e-54 Identities = 602/901 (67%), Gaps = 27/901 (3%) Strand=Plus/Minus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 ||||| || || || || || || || ||||||||||| | | ||||||| ||||| Sbjct 9672517 GAGAACCCCCGCCGCTTTGTCTTCTTTCCCATCGAGTACCATGGCATTTGGCAGATGTAT 9672458 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 || || || || || ||||| ||||||| |||| || ||| | || |||||||| | Sbjct 9672457 AAGAAAGCTGAGGCCTCCTTTTGGACGGCCGAGG--GTGGATCTTTCTAAAGACATTCAG 9672400 Query 61162 GACTGGGAG--CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCT 61219 ||||||| | | | | | || || | ||||||| || | |||| |||| Sbjct 9672399 CACTGGGAAGCCCTGCAGCCTGAGGAGAG--AGATTTCATATCCCACGCTCTGGCTTTCT 9672342 Query 61220 TTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGTG 61278 |||| || ||||| ||||| |||| || | |||| || ||| || || || | Sbjct 9672341 TTGCAGCCAGTGACGGCATCGTGCATGAAAACCTGGTGGAGCGATTTAGC-CAAGACATT 9672283 Query 61279 CAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCG 61338 || | | ||||| || | ||||| || ||||| ||||| ||||| || | || || Sbjct 9672282 CAGATTACAGAGGCCCGCTAGTTCTATGGTTTCCAAATTGCAATGGATAACATACATTCT 9672223 Query 61339 GAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTG 61398 || ||||| ||| | || || || || ||||| | ||| ||| | || | Sbjct 9672222 GAAATGTATAGTCTCCTGATTGACACTTACATTAAAGAGTCCAAAGAAAGGGAGTATCTC 9672163 Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 |||| ||||| ||||| || || |||||| ||| || ||||||||||| |||| Sbjct 9672162 TTCAGTGCCACGGAGACAATGCCTTGTGTGAAGAAGAAGGCAGATTGGGCCTTGCGTTGG 9672103 Query 61459 ATCACCAGTACAACGGC--TACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 || | |||| | ||| | ||| || || | | || ||||| | || || | Sbjct 9672102 ATTGGCG--ACAAAGAAAGTACCTATGGAGAGAGAGTTGTAGCCTTTGCAGCAGTGGAAG 9672045 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 | | || ||| || ||||||||| | ||||| ||| | |||||| | ||||| |||| Sbjct 9672044 GCATCTTCTTCTCCGGTTCGTTTGCCTCCATCTTCTGGCTCAAGAAAGGAGGACTAATGC 9671985 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCAC-GCGACGAGGGCATGCATTGTGATTTT 61635 | || || || || |||||| | || || | | || ||||| |||| ||||| ||| Sbjct 9671984 CAGGCCTCACGTTTTCCAATGAAGTTAT-TCGCAGAGATGAGGGTTTGCACTGTGACTTT 9671926 Query 61636 GC-TGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGA 61694 || || | | | ||||||| | ||| || | || || ||| || | || || Sbjct 9671925 GCCTGCCTCG-TGTTCAAACAC---CTGCTGCACAAACCTTCAGAGCAGAGAGTACAAGA 9671870 Query 61695 GATTGTTCGTGAG-GCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT 61753 || || |||| || || | | ||||||||||| || || || || |||||| | Sbjct 9671869 AATCATT-GTGAATGCTGTCAGAGTAGAACAGGAATTCCTTACGGAAGCCTTGCCCTTGA 9671811 Query 61754 CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTC 61813 ||| || || |||||||| | ||| | ||| | |||||||| || || ||| | | Sbjct 9671810 AACTGATTGGAATGAATTGCACTTTGATGACACAGCACATTGAATTCGTGGCAGACAGGC 9671751 Query 61814 TGTTGGTCGATTTGGGTATGAA---GCGGATCTATAATACGAAAAACCCATTTGATTTCA 61870 | || | || ||||| | || || | || | | || ||||||||||||| || | Sbjct 9671750 TAATGCTGGAACTGGGTTTTAACAAGCTGTTCAA-AGTAG--AAAACCCATTTGACTTTA 9671694 Query 61871 TGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATC 61930 |||| | || || ||||| || |||||||| || || ||||| | |||||||| |||| Sbjct 9671693 TGGAGAACATGTCCCTGGAAGGGAAGACGAACTTCTTTGAGAAGAGAGTAGGCGAGTATC 9671634 Query 61931 A 61931 | Sbjct 9671633 A 9671633 >seq92 Length=6660306 Score = 168 bits (186), Expect = 5e-37 Identities = 565/869 (65%), Gaps = 49/869 (6%) Strand=Plus/Minus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 || || | |||||| | || ||||||| ||||| || || || || |||||||| ||| Sbjct 3254813 TTTCCTACCGAGTACCATGACATTTGGCAGATGTATAAGAAAGCTGAGGCTTCCTTTTGG 3254754 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185 |||| |||||||| ||| |||| || || || | ||||||| | | | || Sbjct 3254753 ACGGCCGAGGAGGTGGATCTGTCTAACGATATTCAGCACTGGGA------AGCCTGAGGA 3254700 Query 61186 GAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAAT 61245 || | ||||||| ||| || | |||||||| || || | || || ||| Sbjct 3254699 GAG--ATATTTCATATCACACGTTCT----TTCTTTGCAGCCAGTGATAGCATAGTGAAT 3254646 Query 61246 GAGAATTTATTGGAACG-TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTA 61304 ||||| | |||| || ||| || | || | || ||||||| Sbjct 3254645 GAGAACCTGGTGGAGCGATTTAGCCTAT-------AAATTTC----------TGTTTCTG 3254603 Query 61305 CGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATAC 61364 |||||||| ||| | ||||| || |||| || || ||||| | | | ||||| || || Sbjct 3254602 TGGCTTCCAAATTACTATGGAAAACATCCATTCTGAAATGTATAATCTCCTCATTGACAC 3254543 Query 61365 GTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGC 61424 || || | || |||| | ||| | |||||||||| | || || || Sbjct 3254542 TTATATTAAAGATTCCAAGGAAAGGGAATATCTCTTCAATGCCACTTAAACAATGCCTTG 3254483 Query 61425 GGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTT 61482 |||||| ||| || ||||||||||| |||||| | |||| | | ||| | | Sbjct 3254482 TGTGAAGGTGAAGGCAGATTGGGCCTTGCGTTGGATTGGAA--ACAAAGAAGTTACCTAT 3254425 Query 61483 GGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCC 61542 || | ||| | | || |||||| || || || | | ||| ||| || ||||| Sbjct 3254424 GGAGTGCGAGTTGTAGCCTTTGCGACAGTGGAAGG---AATCTTCTCTGGTTCATTTGCA 3254368 Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 | || || ||| | |||||||| ||||| ||||| || || | || |||||| | Sbjct 3254367 TCCATTTTCTGGCTCAAGAAACGAGGACTAATGCCTGGCCTCTCATTTTCCAATGAACTT 3254308 Query 61603 AT-ATCACGCGACGAGGGCATGCATTGTGATTTTGC-TGTTTTGCTATTCAAACGCTATC 61660 || | || | || ||||| |||| ||||||||||| || | | | ||||||| | | Sbjct 3254307 ATTAGCA-GAGATGAGGGTTTGCAATGTGATTTTGCCTGCCTCG-TGTTCAAACAC---C 3254253 Query 61661 TGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAG-GCGGTAACTATC 61719 || || | || |||||| || | || || || | ||| || || | | Sbjct 3254252 TGCTGTACAACCCTTCGGAGCAGAGAGTACAAGAAAT----CATGAATGCTGTCAGGAGA 3254197 Query 61720 GAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTA 61779 ||||||||||| ||||| || || ||| ||| || || || |||||||| || Sbjct 3254196 GAACAGGAATTCCTGACGGAGGCCCTGCACGTGAAGCTGATTGGAATGAATTGCACTTTA 3254137 Query 61780 ATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGG 61839 ||| | |||| |||||||| || || ||| | || | || |||||| | || | Sbjct 3254136 ATGACATAGTACATTGAATTCGTGGCAGACAGGCTAACACTGGAATTGGGTTTCAACAAG 3254077 Query 61840 ATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACG 61899 || | || ||||||||||||| || ||||| | ||||| ||||| || |||||| Sbjct 3254076 ATGTTCAAAGTAGAAAACCCATTTGACTTTATGGAGAACATTTCCCTGGAAGGGAAGACG 3254017 Query 61900 AATTTTTTCGAGAAACGTGTAGGCGACTA 61928 || || || ||||| | |||||||| || Sbjct 3254016 AACTTCTTTGAGAAGAGAGTAGGCGAGTA 3253988 >seq25 Length=39250790 Score = 168 bits (186), Expect = 5e-37 Identities = 596/914 (65%), Gaps = 23/914 (3%) Strand=Plus/Plus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 |||| ||| | |||| |||| || | | || || | || ||||||||||| | | Sbjct 34005045 ATGAGCCCTTGCTGCAGTAGAACCCCGGCCACTTTGTTGTCTTTCCCATCGAGTACCATG 34005104 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 | ||||||| ||||| || || || || || ||||| ||||||| |||||| | ||| Sbjct 34005105 ACATTTGGCAGATGTATAAGAAAGCTGAGGCCTCCTTTTGGACGGCCGAGGAGCTGGATC 34005164 Query 61145 TGTCCAAAGACATGAATGACTGGGAG--CGTTTATCGAGCGGTGAACAACATTTCATTAA 61202 | || |||| || | ||||||| | | | | | || || | ||||||| Sbjct 34005165 TTTCTAAAGCCACTCAGCACTGGGAAGCCCTGAAGCCTGAGGAGAG--AGATTTCATATC 34005222 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | |||| |||||||| | || | || || ||||||| | |||| || Sbjct 34005223 CCACGCTCTGGCTTTCTTTGCAACCAGTGATGC-ATAGTGCATGAGAACCTGGTGGAGCG 34005281 Query 61263 -TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || || || || || | | ||||| ||||||||||| |||||||| ||||| | Sbjct 34005282 ATTTAGC-CAAGAAGTTCAGATTACAGAGGCCCGTTGTTTCTATGGCTTCCAAATTGCTA 34005340 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 |||| || | || || || ||||| ||| | || || || || | | ||| | | Sbjct 34005341 TGGAAAACATACATTCTGAAATGTATAGTCTCCTGATTGACACATTAA--AGGTTCCAAG 34005398 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 ||| | || | ||||||| ||| ||||| || || |||||| ||| || | Sbjct 34005399 --GAAAGGGAGTATCTCTTCAATGTCATTGAGACAATGCCTTGTGTGAAGAAGAAGGCAG 34005456 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGC 61499 |||||||||| |||||| | |||| | ||||| | || || ||| | | || Sbjct 34005457 ATTGGGCCTTGCGTTGGATTGGC--GACAAAGAAGCTACCTACGGAGAGCGAGTTGTAGC 34005514 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 ||||| | || || || | || ||| || |||||||| | ||||| ||| | || Sbjct 34005515 CTTTGCAGCAGTGGAAGGCATCTTCTTCTCCGGTTCGTTTGCATCCATCTTCTGGCTCAA 34005574 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGG 61618 |||||| ||||| ||||| || || || || ||| | | || || || | || |||| Sbjct 34005575 GAAACGAGGACTAATGCCAGGCCTCACGTTTTCCAAGGAACTTATTAGCA-GAGATGAGG 34005633 Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGG 61678 | |||| |||| ||||| | | ||||||| | ||| || | || || | Sbjct 34005634 GTTTGCACGGTGACTTTGCCTGCCTCATGTTCAAAC---ACCTGCTGCACAAACCTTCAG 34005690 Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGTG-AGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 || || | || || | | | ||| | || || | || ||||||||||| | | Sbjct 34005691 AGCAGAGAGTACAAGA-AATCATAGTGAATGCTGTCAGGATAGAACAGGAATTCCATATG 34005749 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || || ||| |||| | || | |||||||| | ||| | ||| | ||||| Sbjct 34005750 GAGGCCTTG-CCGTGAAGTTGATTGAAATGAATTGCACTTTGATGACACAGCACGTTGAA 34005808 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || || || || | || || | || ||||| | || ||| | || ||||| Sbjct 34005809 TTCGTGGCAAACAGGCTAATGCTGGAACTGGGTTTTAACAAGATGTTCAAAGTAGAAAAC 34005868 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 ||||||| || ||||| | ||||| ||||| || ||||||| || | ||||| | Sbjct 34005869 TCATTTGACTTTATGGAGAACATTTCCCTGGAAGGGAAGACGAGCTTCTCTGAGAAGAGA 34005928 Query 61918 GTAGGCGACTATCA 61931 |||||||| ||||| Sbjct 34005929 GTAGGCGAGTATCA 34005942 >seq35 Length=22427959 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| |||||||| || |||| |||||||||| ||||| || Sbjct 214637 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCTTTTGATGGTGCCCAGGTTCTGCTG 214696 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| || || || | ||| ||||| | ||||||||| || || ||||| || Sbjct 214697 GTTGCTCTTCCGGTTACAAGAATCTTTGTAGAGCATGTACGGGGTCCCTGTCTCTGTCTG 214756 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 214757 AGACTCAATGATGGCATACCAAAG 214780 Score = 87.8 bits (96), Expect = 1e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 65695 CTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCG 65754 |||||| || |||| ||| |||| || | || || |||||||||| |||||||| | Sbjct 210417 CTCCTTAGCCAGTTCACAACTGGCTTCCAACGCTCCATAATAAATGGTTTCGAAAATTTG 210476 Query 65755 TCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACC-CATCAGGACAAAAGTGT 65813 ||| | | | ||||| |||||| | || ||||| ||||| || ||||| | Sbjct 210477 CTTATTCAATAACTGGGCCTCTGGACTCTCGAAAGG-ATACCTCATCAAGATAAAAGCAT 210535 Query 65814 CGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 | ||||||||||| || ||||| || ||||| |||||||| Sbjct 210536 CTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGACG 210575 >seq3 Length=92262745 Score = 98.7 bits (108), Expect = 8e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| ||| |||| || || |||||||| ||||| || ||| ||| |||||| Sbjct 36780926 CAGGAGGTGCAGGTGCCGGAAGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 36780985 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || | |||||||| || Sbjct 36780986 GTTCACTCAGAGATGTACAGTTTGCTAATAGACGCTTACATCAGAGA 36781032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397527289285280