Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq6128 208 1e-51
seq2498 152 1e-34
>seq6128
Length=1461
Score = 208 bits (230), Expect = 1e-51
Identities = 245/325 (75%), Gaps = 6/325 (2%)
Strand=Plus/Plus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||| ||| |||||| ||| | ||||||||| || ||||| || | | |
Sbjct 368 AGGGGAGTGAAAAAGAACCTGAAACCGTGTGCCTACAAGAAGTTCGAGCCC-GTTAATGG 426
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
|||| |||||||||||| | ||||| || ||||||| | | || |||||||||||
Sbjct 427 GTGAGAGCGTGCCTTTTGTAGAATGAACCGGCGAGTTA-TGTTTACGTGCGAGGTTAAGT 485
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCG 189
| || || |||||||| |||| |||| || || ||||||| | ||| | ||
Sbjct 486 --TGAAGAGACGG-AGCCGAAGGGAAACCGAGTCTGAATAGGGCGAAGTAGTACGAGGAC 542
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
||||| ||||||| ||||| ||||||| ||||||||||||| ||||||| || ||
Sbjct 543 ATAGACCCGAAACCATGTGACCTACCCATGAGCAGGTTGAAGGTGCGGTAAGACGCACTG 602
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||||||||||| | |||||||||||| | |||||||| | |||||| || ||||
Sbjct 603 GAGGACCGAACCAGGGCACGTTGAAAAGTGCTTGGATGACTTGTGGGTAGCGGAGAAATT 662
Query 310 CCAATCAAACTGGGAAATAGCTCGT 334
|||| | |||| ||| |||||| ||
Sbjct 663 CCAAACGAACTTGGAGATAGCTGGT 687
>seq2498
Length=5872
Score = 152 bits (168), Expect = 1e-34
Identities = 229/324 (71%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||| ||| |||||| || || |||| | || |||||| | | ||| |
Sbjct 2943 AGGGGAGTGAAACAGAACCTGAAACCTGATGCATACATACAGTGGGAGCCCATTAATTGG 3002
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
||||| |||| ||||||| |||||| | | |||| ||| ||| ||| || ||||
Sbjct 3003 GTGACTGCGTACCTTTTGTATAATGGGTCAACGACTTACAT-TCAGTAGCAAGCTTAACC 3061
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| | || || || || |||| |||| ||||| |||||| ||||| |||
Sbjct 3062 GAGTAGGGG-----AGGCGCAGGGAAACCGAGTCTTAATAGGGCGTTCAGTTGCTGGGTG 3116
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
||||| ||||||| |||||||| ||| | |||| ||||| ||||||| || |||
Sbjct 3117 TAGACCCGAAACCGAGTGATCTATCCATGGTCAGGATGAAGGTGCGGTAAAACGCACTGG 3176
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
||| ||||||| | |||| ||| | |||||| | || ||||||||||||||
Sbjct 3177 AGGTCCGAACCCACGCATGTTGCAAAATGCGGGGATGAACTGTGGATAGGGGTGAAAGGC 3236
Query 311 CAATCAAACTGGGAAATAGCTCGT 334
|| |||||| ||| |||||| ||
Sbjct 3237 TAAACAAACTCGGAGATAGCTGGT 3260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972714704896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |