Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq2498 77.0 3e-12 >seq2498 Length=5872 Score = 77.0 bits (84), Expect = 3e-12 Identities = 131/186 (70%), Gaps = 7/186 (4%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||||||||||| ||||||| ||||||| ||| || | ||||||| | || | | Sbjct 4033 CTGAAGCTTAGTGGCTTTTCCTGGAAGCGTGGTATTTGCTACTTCGTAACCT---TGGTT 3977 Query 65 ACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCT-AAGATTCCAGCCTACCAC 123 ||||||||||| || ||| ||| | ||||||| ||| | || | ||||| Sbjct 3976 ACTCGTCATCACGTCTCGGTATTAAGAAAGCGGATTTGCCTGCTCACTCTA-CCTACTGG 3918 Query 124 CTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCATT- 182 ||||||| ||| ||||| ||| || || ||||||||||||| ||||||||| Sbjct 3917 CTTAAACAATCACATCCAACCGATTGCTAGCATAACCTTCTCCGTCCCCACATCGCATTT 3858 Query 183 -AACCA 187 ||||| Sbjct 3857 GAACCA 3852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518355967104