Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq2498 511 1e-142
seq4146 298 1e-78
>seq2498
Length=5872
Score = 511 bits (566), Expect = 1e-142
Identities = 359/408 (88%), Gaps = 1/408 (0%)
Strand=Plus/Plus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TACCATAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 874
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
||||||||||||||||||||||||||||||| |||||| ||||| | |||| ||| |||
Sbjct 875 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCAGACGGTTATTTAAGTCAGATGT 934
Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182
|||||||||| ||||||| |||||| ||| |||| |||| |||||||| ||| |||
Sbjct 935 GAAATCCCCGAGCTTAACTTGGGAACTGCGTTTGAAACTGGGTAACTAGAGTATGTAAGA 994
Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242
| ||||| ||||||||||||||||||||||||||||||| ||||||| ||| ||| ||||
Sbjct 995 GAGGGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAAGAATACCGATGG 1054
Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302
||||||||||||| ||||| || ||||||| |||||| ||||||||||||||||||||||
Sbjct 1055 CGAAGGCAGCCCCTTGGGACAATACTGACGTTCATGCTCGAAAGCGTGGGGAGCAAACAG 1114
Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362
||||||||||||||||||||||||||||||||||| |||| ||| |||||||| |
Sbjct 1115 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAATTAGCTGTTGGGGCACGAGA 1174
Query 363 TCCTT-GGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
| || ||| || |||||||||||||| ||||||||||||||| |||
Sbjct 1175 TGTTTCAGTAGCGAAGCTAACGCGTGAAATTGACCGCCTGGGGAGTAC 1222
>seq4146
Length=3813
Score = 298 bits (330), Expect = 1e-78
Identities = 302/391 (77%), Gaps = 3/391 (1%)
Strand=Plus/Minus
Query 21 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTA 80
|||||||||||||||||||||||||||||||||||||| | ||||||| |||| |||
Sbjct 3807 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTATCCGGATTTA 3748
Query 81 CTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAAC 140
||||||||||||| |||||||||||| | ||| | | || ||| | ||||||||
Sbjct 3747 TTGGGCGTAAAGCGAGCGCAGGCGGTTTAGAAAGTCTGAAGTTAAAGGCTGTGGCTTAAC 3688
Query 141 CTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACG 200
| | || || || | ||||| ||| ||||| || |||| ||||||||||| |
Sbjct 3687 CATAGTAT-GCTTTGGAAACTGCTAAACTTGAGTGCAGAAGGGGGGAGTGGAATTCCATG 3629
Query 201 TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260
|||||| ||||||||||||||||| |||||||||||| ||||||| || || | ||||
Sbjct 3628 TGTAGCGGTGAAATGCGTAGATATATGGAGGAACACCGGTGGCGAAAGCGGCTCTCTGGT 3569
Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 320
| ||||||||| | || |||||||||||| ||| |||||||||||||||||||||||
Sbjct 3568 CTGTAACTGACGCTGAGGCTCGAAAGCGTGGGTAGCGAACAGGATTAGATACCCTGGTAG 3509
Query 321 TCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC--TTCCTTGGTAACGTAGC 378
|||||||| |||||||| |||| |||| || | | ||| || ||||||
Sbjct 3508 TCCACGCCGTAAACGATGAGTGCTAGGTGTTAGGCCCTATCCGGGGCTTAGTGCCGTAGC 3449
Query 379 TAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
|||||| ||| ||||||||||| |||
Sbjct 3448 TAACGCAATAAGCACTCCGCCTGGGGAGTAC 3418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289486927872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |