Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq2498 159 5e-37
seq4146 156 6e-36
>seq2498
Length=5872
Score = 159 bits (176), Expect = 5e-37
Identities = 189/252 (75%), Gaps = 7/252 (3%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| ||||||| |||||||||||||||| || ||||| || |||| | || || |||
Sbjct 4297 TTAACCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 4239
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
| ||||||||||| ||||||||||| || | |||||||||||| | ||| |
Sbjct 4238 GTGCTGTGTTTTTAATAAACAGTCGCAGCCACCGTTTCTCTGCGACCCTCCTATGCTTAC 4179
Query 122 ----CACGTCGTTCACCAGCAGTGGC-ACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176
|| | | ||||| | || || | ||||||||||||||||||| || |||||
Sbjct 4178 AGGGCAAGCCTTTCAC-ATTAGAGGGTATACCTTCTCCCGAAGTTACGGTATCAATTTGC 4120
Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236
||| |||||| || ||||| | | | |||||||| |||||| |||| ||||||||||
Sbjct 4119 CGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATTCTCATCCTGCCCACCTGTGT 4060
Query 237 CGGTTTACGGTA 248
|||||| |||||
Sbjct 4059 CGGTTTGCGGTA 4048
>seq4146
Length=3813
Score = 156 bits (172), Expect = 6e-36
Identities = 185/248 (75%), Gaps = 22/248 (9%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| |||||||||||||||| || |||||||| ||||| | || |||
Sbjct 275 CTTAACCTTCCAGCACCGGGCAGGCGTCACCCCCTATACATCATCTTACGAT-TTAGCAG 333
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
|| |||||||||| |||||||| |||| |||||| ||||| |||||
Sbjct 334 AGAGCTGTGTTTTTGATAAACAGTTGCTTGGGCCTATTCACTGCG----------GCTCA 383
Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180
||| || || | | | |||||||||||||||||||||||||||||||||||
Sbjct 384 ----GTC--TC----GCTGAG-CGCCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAG 432
Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240
||||||||| | ||||| | ||| | ||| || | ||| | ||| ||||||||||||
Sbjct 433 TTCCTTAACGAGAGTTCTCTCGATCACCTGAGGCTACTCGCCTCGACTACCTGTGTCGGT 492
Query 241 TTACGGTA 248
|| |||||
Sbjct 493 TTGCGGTA 500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694341017664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |