Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq2498 168 6e-40
seq4146 100 3e-19
>seq2498
Length=5872
Score = 168 bits (186), Expect = 6e-40
Identities = 116/131 (89%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 26 CTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAA 85
||||| | |||||| | | ||||| ||| | || |||||||||||||||||||||
Sbjct 4171 CTTGCCCTGTAAGCATAGGAGGGTCGCAGAGAAACGGTGGCTGCGACTGTTTATTAAAAA 4230
Query 86 CACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGA 145
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 4231 CACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCTGGA 4290
Query 146 AGGTTAATTGA 156
|||||||||||
Sbjct 4291 AGGTTAATTGA 4301
>seq4146
Length=3813
Score = 100 bits (110), Expect = 3e-19
Identities = 78/93 (84%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119
||||| || ||||||||| ||||||||||| |||||| || || ||| || |||||
Sbjct 368 AGGCCCAAGCAACTGTTTATCAAAAACACAGCTCTCTGCTAAATCGTAAGATGATGTATA 309
Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| |||||||||||||||||| ||||||||||
Sbjct 308 GGGGGTGACGCCTGCCCGGTGCTGGAAGGTTAA 276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476759500608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |