Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq303 109 3e-22 seq4 78.8 4e-13 >seq303 Length=2969825 Score = 109 bits (120), Expect = 3e-22 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 30 TAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGG 89 ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| Sbjct 370413 TAATGGCGAGTGAACAGGGAAGAGCCCAGCACCGAATCCCCGCCCCGCTGTGGGGCACGG 370472 Query 90 GACATGTGGCGTA 102 || |||||||||| Sbjct 370473 GAAATGTGGCGTA 370485 >seq4 Length=39680227 Score = 78.8 bits (86), Expect = 4e-13 Identities = 75/96 (78%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61 |||||||||||||||| |||| || | || | ||||||||||||||||| |||| || Sbjct 3362687 GAAAAGAAACTAACCACAATTCTCTTAACAAAGATGAGTGAACAGGGAAGAGTCCAGTGC 3362746 Query 62 CGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTG 97 ||| ||| |||| | ||| |||| || | ||||| Sbjct 3362747 TGAACCCCTGCCCTGTGGTCTGGCGTGGAAAATGTG 3362782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230381061120