Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq4146 453 2e-125 seq2498 242 8e-62 >seq4146 Length=3813 Score = 453 bits (502), Expect = 2e-125 Identities = 321/365 (88%), Gaps = 2/365 (1%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || || |||||||||| || | || ||||||||||||||| | ||||||||||||||||| Sbjct 88 TAACCTGCATCTTCACAGGTACTAAAATTTCACCGAGTCTCTCGTTGAGACAGTGCCCAA 147 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 148 ATCATTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 207 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||||||||||| | |||| ||||| |||| |||| Sbjct 208 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAGATCTTCGCTTGCGCTAAA 267 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 ||| ||||||||||||||||||||||||||||| | |||||||||| |||| ||| | Sbjct 268 CCCTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCACCCCCTATACATCATCTTACGATT 327 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC-CTGTCA 299 ||||||| | ||||||||||| |||||||| |||||||||||||| ||||||| | ||| Sbjct 328 TAGCAGAGAGCTGTGTTTTTGATAAACAGTTGCTTGGGCCTATTCACTGCGGCTCAGTC- 386 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAG 359 | | || ||||||||||| ||||||||||| ||||||||||||||||||||| | || Sbjct 387 TCGCTGAGCGCCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAGTTCCTTAACGAGAG 446 Query 360 TTCTC 364 ||||| Sbjct 447 TTCTC 451 >seq2498 Length=5872 Score = 242 bits (268), Expect = 8e-62 Identities = 282/384 (73%), Gaps = 36/384 (9%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| ||| ||| ||| | |||||| | ||||||||| |||||| Sbjct 4470 GCATCTTCACAACCATTTCAACTTCGCTGAGTCTCGGGAGGAGACAGTGTGGCCATCGTT 4411 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4410 ACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 4351 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 |||||||||||||||||||||||||||| | | ||| |||| ||| | | Sbjct 4350 TAGTTACGGCCGCCGTTTACTGGGGCTT--------CGATCCGA-TGCTTGCACATCTTC 4300 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||||||||||||||||||||||||||| ||||||| || ||| || || |||| Sbjct 4299 AATTAACCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 4240 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG--------------- 291 | |||||||||| ||||||||||| || ||||||||| Sbjct 4239 AGTGCTGTGTTTTTAATAAACAGTCGCAGCCACCGTTTCTCTGCGACCCTCCTATGCTTA 4180 Query 292 --------GCCTGTCA---TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTG 340 |||| ||| |||| || | ||||||||| ||||||||| ||| |||| Sbjct 4179 CAGGGCAAGCCTTTCACATTAGA-GGGTATACCTTCTCCCGAAGTTACGGTATCAATTTG 4121 Query 341 CCGAGTTCCTTAACAATAGTTCTC 364 ||||||||||| | ||||||| Sbjct 4120 CCGAGTTCCTTCTCCCGAGTTCTC 4097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062306848768