Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq4146 493 4e-137 seq2498 491 1e-136 >seq4146 Length=3813 Score = 493 bits (546), Expect = 4e-137 Identities = 324/354 (92%), Gaps = 4/354 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3420 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 3361 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC-TCTGACCCCT 119 |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || Sbjct 3360 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCCTCTGACGGCT 3301 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 |||||||||||| || | ||| || | | || | |||||||| |||||||||||||||| Sbjct 3300 CTAGAGATAGAGTTT--CTCTTAGGAGCAGAG-GAGACAGGTGGTGCATGGTTGTCGTCA 3244 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 3243 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATTGTTAGTTG 3184 Query 240 CCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGA 299 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct 3183 CCATCATTAAGTTGGGCACTCTAGCGAGACTGCCGGTAATAAACCGGAGGAAGGTGGGGA 3124 Query 300 CGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGG 353 ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 3123 TGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGG 3070 >seq2498 Length=5872 Score = 491 bits (544), Expect = 1e-136 Identities = 408/496 (82%), Gaps = 2/496 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct 1220 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGAT 1279 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||| ||||||||| |||||||||||||||||||| ||||||||| | || | Sbjct 1280 GTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATGTACGGAAGATTT 1339 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||| ||| || |||||||| | | | ||||||| ||||||| ||||||||| Sbjct 1340 CAGAGAT-GAGATTGTGCCTTCGGGAGCCGTAAC-ACAGGTGCTGCATGGCTGTCGTCAG 1397 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1398 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGC 1457 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 |||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct 1458 CATCATTAAGTTGGGCACTCTAGCGAGACTGCCGGTAATAAACCGGAGGAAGGTGGGGAT 1517 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| || ||||| ||||||||| ||||| ||||||| |||||||| ||| Sbjct 1518 GACGTCAAGTCCTCATGGCCCTTATGACCAGGGCTTCACACGTCATACAATGGTTGGTAC 1577 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 | |||| ||| || |||||| | ||| ||||||| |||| || ||| ||||||| Sbjct 1578 AGAGGGTAGCCAAGTCGCGAGATGGAGCCAATCCCAGAAAGCCAATCGTAGTCCGGATTG 1637 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480 | |||||||||||| | |||||| ||||||||||||||||| |||||||| || | Sbjct 1638 CACTCTGCAACTCGAGTGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCACGCCGC 1697 Query 481 GGTGAATACGTTCCCG 496 |||||||||||||||| Sbjct 1698 GGTGAATACGTTCCCG 1713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503868129280