Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 493 4e-137
seq2498 491 1e-136
>seq4146
Length=3813
Score = 493 bits (546), Expect = 4e-137
Identities = 324/354 (92%), Gaps = 4/354 (1%)
Strand=Plus/Minus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3420 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 3361
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC-TCTGACCCCT 119
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||
Sbjct 3360 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCCTCTGACGGCT 3301
Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179
|||||||||||| || | ||| || | | || | |||||||| ||||||||||||||||
Sbjct 3300 CTAGAGATAGAGTTT--CTCTTAGGAGCAGAG-GAGACAGGTGGTGCATGGTTGTCGTCA 3244
Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 3243 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATTGTTAGTTG 3184
Query 240 CCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGA 299
||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||
Sbjct 3183 CCATCATTAAGTTGGGCACTCTAGCGAGACTGCCGGTAATAAACCGGAGGAAGGTGGGGA 3124
Query 300 CGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGG 353
||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3123 TGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGG 3070
>seq2498
Length=5872
Score = 491 bits (544), Expect = 1e-136
Identities = 408/496 (82%), Gaps = 2/496 (0%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| || |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1220 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGAT 1279
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||| ||||||||| |||||||||||||||||||| ||||||||| | || |
Sbjct 1280 GTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATGTACGGAAGATTT 1339
Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180
|||||| ||| || |||||||| | | | ||||||| ||||||| |||||||||
Sbjct 1340 CAGAGAT-GAGATTGTGCCTTCGGGAGCCGTAAC-ACAGGTGCTGCATGGCTGTCGTCAG 1397
Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1398 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGC 1457
Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300
|||||||||||||||||||||| |||||||||| | ||||||||||||||||||||
Sbjct 1458 CATCATTAAGTTGGGCACTCTAGCGAGACTGCCGGTAATAAACCGGAGGAAGGTGGGGAT 1517
Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360
|||||||| || ||||| ||||||||| ||||| ||||||| |||||||| |||
Sbjct 1518 GACGTCAAGTCCTCATGGCCCTTATGACCAGGGCTTCACACGTCATACAATGGTTGGTAC 1577
Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420
| |||| ||| || |||||| | ||| ||||||| |||| || ||| |||||||
Sbjct 1578 AGAGGGTAGCCAAGTCGCGAGATGGAGCCAATCCCAGAAAGCCAATCGTAGTCCGGATTG 1637
Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480
| |||||||||||| | |||||| ||||||||||||||||| |||||||| || |
Sbjct 1638 CACTCTGCAACTCGAGTGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCACGCCGC 1697
Query 481 GGTGAATACGTTCCCG 496
||||||||||||||||
Sbjct 1698 GGTGAATACGTTCCCG 1713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503868129280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |