Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 156 5e-36
seq2498 109 6e-22
>seq4146
Length=3813
Score = 156 bits (172), Expect = 5e-36
Identities = 139/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83
||||||||| ||||| |||||||||| | |||||||||| | ||||| |||||||| ||
Sbjct 64 GGGGTCTTTCCGTCCTGTCGCGGGTAACCTGCATCTTCACAGGTACTAAAATTTCACCGA 123
Query 84 G-CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| ||| || ||||||||| ||| || ||||||| |||||||||||||||
Sbjct 124 GTCTCTCG-TTGAGACAGTGCCCAAATCATTACGCCTTTCGTGCGGGTCGGAACTTACCC 182
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 183 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 242
>seq2498
Length=5872
Score = 109 bits (120), Expect = 6e-22
Identities = 129/181 (71%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| ||||| | |||||||||| | | ||| ||| |||
Sbjct 4501 CGGGGTCTTTCCGTCTAGCAGCGGGGAGATTGCATCTTCACAACCATTTCAACTTCGCTG 4442
Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141
|| || ||| | |||||| ||| |||||||||| ||||||||||||||
Sbjct 4441 AG-TCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCGGGTCGGAACTTACC 4383
Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201
|||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 4382 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 4323
Query 202 C 202
|
Sbjct 4322 C 4322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547153520832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |