Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq2498 318 1e-84 >seq2498 Length=5872 Score = 318 bits (352), Expect = 1e-84 Identities = 276/337 (82%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| || ||||||||||| |||||||||||| || | ||| Sbjct 762 CTTTACAATCCGAAGACCTTCTT-CATACACGCGGCAT-GGCTGGATCAGGGTTCCCCCC 705 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 704 ATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 645 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||||||||||||||| | ||| |||||||| |||||| ||| ||||| || Sbjct 644 TGTGGCGGATCATCCTCTCAGACCCGCTACTGATCGTCGGCTTGGTAGGCCTTTACCCCA 585 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||| |||||| | | | |||| ||| |||||| ||| | | |||| |||| Sbjct 584 CCAACTACCTAATCAGTCATTGGCTGATCAATTAGCGCGAGGTCTTGCGAGCCCCCGCTT 525 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGC-GTCCGTTTCCGAACGTTATCCCCCACTACCA 299 || ||| ||| |||||||||||||| |||| |||| || |||||||||| ||| Sbjct 524 TCCCCCTCAGGGTATATGCGGTATTAGCTGTCC-TTTCGGACAGTTATCCCCCTCTAATC 466 Query 300 GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 || | ||||| | | ||||||||||| |||| ||| Sbjct 465 GGTACATTCCAATGTTATACTCACCCGTTCGCCACTC 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071906007040