Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq6128 322 2e-85
seq2498 302 2e-79
>seq6128
Length=1461
Score = 322 bits (356), Expect = 2e-85
Identities = 429/589 (73%), Gaps = 18/589 (3%)
Strand=Plus/Minus
Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60
||||||||||| |||| | | |||||||| || |||| | | | | ||||||||
Sbjct 850 TCGACTACGGATCTTAG-CACTCGCAGTCTGACTGCCGACCA-TAAATCTTTGGCATTCG 793
Query 61 GAGTTTGGTTGATTTCGGTAAGCTT-GTGGGCCCCCTAGACCATCCAGTGCTCTACCTCC 119
|||||| ||| | ||||| | | || ||||| ||| |||||||||||||||
Sbjct 792 GAGTTTATCTGAGATTGGTAATCCGAGATGGACCCCTCACCCAAACAGTGCTCTACCTCC 733
Query 120 GGGAAGAAACACG-CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAA 178
|| || ||||||| |||||| ||||||| |||||||||||||| | ||
Sbjct 732 AAGATTCTTCATTTCGACGCTAGCCCTAAAGCTATTTCGGAGAGAACCAGCTATCTCCAA 673
Query 179 GTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGG 238
||| | |||| |||| || ||| ||||| ||||||| || |||||||| | ||
Sbjct 672 GTTCGTTTGGAATTTCTCCGCTACCCACAAGTCATCCAAGCACTTTTCAACGTGCCCTGG 613
Query 239 TTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCT 298
|||||||||||| |||||||| ||||||||||| ||||| ||| |||| | | |
Sbjct 612 TTCGGTCCTCCAGTGCGTCTTACCGCACCTTCAACCTGCTCATGGGTAGGTCACATGGTT 553
Query 299 TCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCC 358
|||||||| || | ||| | |||||||||| |||||| |||| || ||||| |
Sbjct 552 TCGGGTCTATGTCCTCGTACTACTTCGCCCTATTCAGACTCGGTTTCCCTTCGGCTCCGT 493
Query 359 CAC-ACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417
| | | |||||||||| || || ||||||| || ||||||| |||||||||||
Sbjct 492 CTCTTCAACTTAACCTCGC-ACGTAAACATAACTCGCCGGTTCATTCTACAAAAGGCACG 434
Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477
| ||||| | | || || |||| || ||||||||||| ||||||||
Sbjct 433 CTCTCACC-----CATTAACGG-------GCTCGAACTTCTTGTAGGCACACGGTTTCAG 386
Query 478 GTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537
|| || ||||||||||| || ||||| ||||||||||||||||||||||||| || | ||
Sbjct 385 GTTCTTTTTCACTCCCCTCCCGGGGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCACT 326
Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586
||||||||| | |||||||||||| || | |||||| ||||||||
Sbjct 325 ATCGGTCACTAGGGAGTATTTAGGGTTGGGAGATGGTCCTCCCAGATTC 277
>seq2498
Length=5872
Score = 302 bits (334), Expect = 2e-79
Identities = 377/509 (74%), Gaps = 17/509 (3%)
Strand=Plus/Minus
Query 91 CCCCCTAGACCATC-CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAAT 149
|||||||| |||| ||||||| |||| || | ||| | | || || ||||||||
Sbjct 3332 CCCCCTAG-CCATAACAGTGCTTTACCCCCAG-AAGTGATGCATGAGGCACTACCTAAAT 3275
Query 150 GCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGG 209
||||||||||||||||||||| | |||||| || |||||||||||||||||||||
Sbjct 3274 AGTTTTCGGGGAGAACCAGCTATCTCCGAGTTTGTTTAGCCTTTCACCCCTATCCACAGT 3215
Query 210 TCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTT 269
|||||||| || ||| |||| | |||||||||| |||||| || ||||| |||
Sbjct 3214 TCATCCCCGCATTTTGCAACATGCGTGGGTTCGGACCTCCAGTGCGTTTTACCGCACCTT 3155
Query 270 CAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCT 329
|| |||| |||||||||||||||| | ||||||||| | | || ||| | |||||||
Sbjct 3154 CATCCTGACCATGGATAGATCACTCGGTTTCGGGTCTACACCCAGCAACTGA-ACGCCCT 3096
Query 330 ATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAA 389
||| |||||| |||| || || || ||| || | |||||| || || || || | ||
Sbjct 3095 ATTAAGACTCGGTTTCCCTGCGCCTCCCCTACTC-GGTTAAGCTTGCTACTGAATG-TAA 3038
Query 390 CTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCT 449
||| | | |||| | ||||||| |||| |||||| | ||| | |||
Sbjct 3037 GTCGTTGACCCATTATACAAAAGGTACGCAGTCACC---CAATTAA--------TGGGCT 2989
Query 450 CCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTT 509
|| || | |||| ||| |||||||||| || ||||||||||| || ||||| |||||
Sbjct 2988 CCCACTGTATGTATGCATCAGGTTTCAGGTTCTGTTTCACTCCCCTCCCGGGGTTCTTTT 2929
Query 510 CACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGG 569
| |||||||||||||||||| || | ||||||||| | |||||||||| ||| ||
Sbjct 2928 CGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATGATGAGTATTTAGCCTTGGAGG 2869
Query 570 GTGGTCCCGCCAGATTCACACGAAATTTC 598
||||||| ||| |||| || |||||
Sbjct 2868 ATGGTCCCCCCATCTTCAGACAGGATTTC 2840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817440632832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |