Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq2498 201 9e-50 seq4146 89.7 4e-16 >seq2498 Length=5872 Score = 201 bits (222), Expect = 9e-50 Identities = 138/156 (88%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | |||||||||||||||| |||||||||||| ||||| |||||| Sbjct 1652 TCGAGTTGCAGAGTGCAATCCGGACTACGATTGGCTTTCTGGGATTGGCTCCATCTCGCG 1593 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct 1592 ACTTGGCTACCCTCTGTACCAACCATTGTATGACGTGTGAAGCCCTGGTCATAAGGGCCA 1533 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156 |||||||||||||||||||||||||||||||||||| Sbjct 1532 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 1497 >seq4146 Length=3813 Score = 89.7 bits (98), Expect = 4e-16 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| ||||| |||||||| ||||| || ||||||||||||||| Sbjct 3070 CCATTGTAGCACGTGTGTAGCCCAGGTCATAAGGGGCATGATGATTTGACGTCATCCCCA 3129 Query 143 CCTTCCTCCGGTTT 156 |||||||||||||| Sbjct 3130 CCTTCCTCCGGTTT 3143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415964664960