Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 271 1e-70
seq2498 176 7e-42
>seq4146
Length=3813
Score = 271 bits (300), Expect = 1e-70
Identities = 227/274 (83%), Gaps = 3/274 (1%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| ||||||||||||||||| | |||| | |||| |||||||| |||||
Sbjct 3537 CCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAGAGCCGCTTTCGCCACCGGTGT 3596
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||||| ||||||||||||||||||||||||||| |||||||| | || || | ||||
Sbjct 3597 TCCTCCATATATCTACGCATTTCACCGCTACACATGGAATTCCACTCCCCCCTTCTGCAC 3656
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAG-TTTTCACATCTGAC 179
||||| | ||||||| || ||| |||| |||| || ||| || ||| || || |||
Sbjct 3657 TCAAGTTTAGCAGTTTCCAAAGCATACTAT-GGTTAAG-CCACAGCCTTTAACTTCAGAC 3714
Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239
|| | |||||| | | | |||||| |||||||||||||||||||||| | ||||||
Sbjct 3715 TTTCTAAACCGCCTGCGCTCGCTTTACGCCCAATAAATCCGGATAACGCTCGGGACCTAC 3774
Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGT 273
||||||||||||||||||||||||||||||||||
Sbjct 3775 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGT 3808
>seq2498
Length=5872
Score = 176 bits (194), Expect = 7e-42
Identities = 219/295 (74%), Gaps = 10/295 (3%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAAT---CCGCCTTCGCCACTGG 57
|||||||||||| || | | ||||||| | ||||| ||| | |||||||||| ||
Sbjct 1104 CCCACGCTTTCGAGCATGAACGTCAGT-ATTGTCC--CAAGGGGCTGCCTTCGCCATCGG 1048
Query 58 TGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAG 117
| ||| ||| || |||||||||||||| ||||||| ||||||| ||||||
Sbjct 1047 TATTCTTCCACATCTCTACGCATTTCACTGCTACACGTGGAATTCTACC--CCTCTCTTA 990
Query 118 CA--CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATC 175
|| ||| || | |||||||||| |||| ||| ||| | | |||||||||
Sbjct 989 CATACTCTAGTTACCCAGTTTCAAACGCAGTTCCCAAGTTAAGCTCGGGGATTTCACATC 930
Query 176 TGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCAC 235
|||||| | ||| || | | | |||||| |||| ||| |||| ||||||| || |
Sbjct 929 TGACTTAAATAACCGTCTGCGCTCGCTTTACGCCCAGTAATTCCGATTAACGCTCGCACC 870
Query 236 CTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||||||||||||||||||||||||||||||||||| |||||||| | ||||
Sbjct 869 CTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTATGGTA 815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828729601728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |