Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq190 87.8 2e-15 >seq190 Length=6459378 Score = 87.8 bits (96), Expect = 2e-15 Identities = 127/176 (72%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 ||||||||||||||||||||| ||||||| |||||| || | |||| | | Sbjct 5676129 TTTACTTTGAAAAAATTAGAGTGTTCAAACCAGGCCCGAGAGGCCAGGATACCGCAGCTA 5676070 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| ||||||||||||||| ||||| | ||| | | |||| Sbjct 5676069 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 5676012 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||| ||||||||||| Sbjct 5676011 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTTAAATTCTTGGA 5675956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511956510720