Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq2498 277 3e-72 >seq2498 Length=5872 Score = 277 bits (306), Expect = 3e-72 Identities = 225/273 (82%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 3 AGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC 62 ||| | | |||| |||||||||| |||||| |||||| ||||| ||||||||| ||| || Sbjct 5207 AGGCGAGTTTCGCGCTTAGATGCTTTCAGCGCTTATCTCTTCCGAACTTAGCTACCCGGC 5148 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 |||| |||| ||||| ||| ||||||||||| ||||| |||||||||||||||| Sbjct 5147 GATGCGACTGGCGTCACAACCGGTACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACT 5088 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | | |||| || ||||| |||| |||||||| | |||||||||| ||||||||| || Sbjct 5087 AGGAGCAGCCCCCGTCAAACTTCCAACGCCCACTGCAGATAGGGACCAAACTGTCTCACG 5028 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||| | |||||||||| ||| || |||||| ||||||||||| |||||||||||| Sbjct 5027 ACGTTTTAAACCCAGCTCACGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCG 4968 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| ||||||||||||| || |||||||||||| Sbjct 4967 ACTACAGCCCCAGGATGTGATGAGCCGACATCG 4935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780733678848