Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq2498 338 2e-90 >seq2498 Length=5872 Score = 338 bits (374), Expect = 2e-90 Identities = 324/414 (78%), Gaps = 6/414 (1%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 ||||||||||| |||||| |||||||||||||||||||||||||| |||||| || | || Sbjct 765 GTACTTTACAATCCGAAGACCTTCTTCATACACGCGGCATGGCTGGATCAGGGTTCCCCC 706 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 705 CATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 646 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||| | ||||||||||||||| |||| |||||||| || ||| |||| ||||||| Sbjct 645 GTGTGGCGGATCATCCTCTCAGACCCGCTACTGATCGTCGGCTTGGTAGGCCTTTACCCC 586 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 ||||||| |||||| | || | ||| ||| | |||| | | ||||| || Sbjct 585 ACCAACTACCTAATCAGTCATTGGCTGATCAATTAGCGCGAGGTCTTGCGAGCCCCCGCT 526 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300 || | | | |||||||||||||| | |||| |||||||||||| | Sbjct 525 TTCCCCCTCAGGGTATATGCGGTATTAGCTGTCCTTTCGGACAGTTATCCCCCTCTAATC 466 Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTT 360 || | |||| | ||||||||||| |||||||||||||| || ||| | Sbjct 465 GGTACATTCCAATGTTATACTCACCCGTTCGCCACTCGTCAGC--AGACCGAAG----TC 412 Query 361 CCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| ||||||||||||||||||||| | || |||||||||||||||||||||| Sbjct 411 CCTGCTACCGTTCGACTTGCATGTGTAAAGCATGCCGCCAGCGTTCAATCTGAG 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222292819968