Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq2498 288 3e-75
seq4146 109 2e-21
>seq2498
Length=5872
Score = 288 bits (318), Expect = 3e-75
Identities = 277/361 (77%), Gaps = 26/361 (7%)
Strand=Plus/Plus
Query 165 CTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAG 224
|||||||| |||||||| ||||| ||| ||||||| |||||||||||||| | |||||
Sbjct 569 CTGATTAGGTAGTTGGTGGGGTAAAGGCCTACCAAGCCGACGATCAGTAGCGGGTCTGAG 628
Query 225 AGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTG 284
||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||||||||
Sbjct 629 AGGATGATCCGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTG 688
Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344
|||||| ||| |||||||| || |||||| |||| | |||||||| || ||||| |
Sbjct 689 GGGAATTTTGGACAATGGGGGGAACCCTGATCCAGCCATGCCGCGTGTATGAAGAAGGTC 748
Query 345 TTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-------------------------TAA 379
||||| | |||||| || | | |||||| | |
Sbjct 749 TTCGGATTGTAAAGTACTTTTGTATGGGAAGAAGATGAGCTGGTTAAGAGCTGGCTCTGA 808
Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439
||||||||| | || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 809 TGACGGTACCATAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 868
Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499
||| || ||||||| |||||||||| |||||||||| | ||| || |||| ||||||
Sbjct 869 GGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGAGCGCAGACGGTTATTTAAGT 927
Query 500 C 500
|
Sbjct 928 C 928
>seq4146
Length=3813
Score = 109 bits (120), Expect = 2e-21
Identities = 83/97 (86%), Gaps = 1/97 (1%)
Strand=Plus/Minus
Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463
|||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||
Sbjct 3807 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTATCCGGATTTA 3748
Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
| |||||||||| | ||| ||| ||||| |||||
Sbjct 3747 -TTGGGCGTAAAGCGAGCGCAGGCGGTTTAGAAAGTC 3712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497468690432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |