Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq2498 470 5e-130
seq6128 282 1e-73
>seq2498
Length=5872
Score = 470 bits (520), Expect = 5e-130
Identities = 405/495 (82%), Gaps = 6/495 (1%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| || |||||| |||| ||||||||||||||||||||| ||||||||| ||||
Sbjct 3085 CGAGTCTTAATAGGGCGTTCAGTTGCTGGGTGTAGACCCGAAACCGAGTGATCTATCCAT 3144
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
|| ||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||
Sbjct 3145 GGTCAGGATGAAGGTGCGGTAAAACGCACTGGAGGTCCGAACCCACGCATGTTGCAAAAT 3204
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
|||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||||
Sbjct 3205 GCGGGGATGAACTGTGGATAGGGGTGAAAGGCTAAACAAACTCGGAGATAGCTGGTTCTC 3264
Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240
|||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||
Sbjct 3265 CCCGAAAACTATTTAGGTAGTGCCTCATGCATCACTTCTGGGGGTAAAGCACTGTTATGG 3324
Query 241 CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTACC 300
||||||||||||||||||||||||| |||| |||||||| |||| | ||| | |
Sbjct 3325 CTAGGGGGTCATTGCGACTTACCAACCCATGGCAAACTCAGAATACCAGAAAGTGCAAGC 3384
Query 301 GCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATC 360
||||| || |||||||||| |||| | | ||||| || || || ||| |
Sbjct 3385 ATGGGAGACAGACGGTGGGTGCTAACGTCCATCGTCAAGAGGGAAACAACCCAGACCGCC 3444
Query 361 AGCTAAGGCCCCGAAATGACAG-CTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGC 419
|||||||| ||| ||||||||| ||||| | |||||||| || || |||||||
Sbjct 3445 AGCTAAGGTCCC-AAATGACAGATTAAGTGGTA--AACGAAGTGGGAAGGCACAGACAGC 3501
Query 420 TAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGA 479
||||||||||||| |||||||||| ||||||||||| |||||| |||||||| |||||
Sbjct 3502 CAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTGGTCGA 3560
Query 480 GGAGTCGGGCGTGGA 494
| ||| ||| |||
Sbjct 3561 GTCGTCCTGCGCGGA 3575
>seq6128
Length=1461
Score = 282 bits (312), Expect = 1e-73
Identities = 360/488 (74%), Gaps = 17/488 (3%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
|||||| ||| ||||||| ||| || |||||||||||||| |||| |||||||
Sbjct 511 CGAGTCTGAATAGGGCGAAGTAGTACGAGGACATAGACCCGAAACCATGTGACCTACCCA 570
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
|| |||| |||||||||||||| |||| ||||||| ||||||| | ||||||||
Sbjct 571 TGAGCAGGTTGAAGGTGCGGTAAGACGCACTGGAGGACCGAACCAGGGCACGTTGAAAAG 630
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
| |||||| ||||||||| || |||| | |||| |||||||| ||||||||||||
Sbjct 631 TGCTTGGATGACTTGTGGGTAGCGGAGAAATTCCAAACGAACTTGGAGATAGCTGGTTCT 690
Query 180 CTCCGAAAACTATTTAGG--TAGTGCC----TCAAGTATCACCATCGGGGGTAGAGCACT 233
|||||||| |||||| ||| | | | ||| ||| | || |||||||||||
Sbjct 691 CTCCGAAATAGCTTTAGGGCTAGCGTCGAAATGAAGAATC----TTGGAGGTAGAGCACT 746
Query 234 GTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAG 293
||| || ||||| ||| || ||||||| | ||||||||||||| || ||
Sbjct 747 GTTTGGGTGAGGGGTCCATCTCGGATTACCAATCTCAGATAAACTCCGAATGC-CA-AAG 804
Query 294 TTTTACCG-CGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352
|||| | ||| ||| || | |||||||| ||||| ||| ||| || | ||
Sbjct 805 ATTTATGGTCGGCAGTCAGACTGCGAGTGCTAAGATCCGTAGTCGAAAGGGAAACAGCCC 864
Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412
||| | ||||||||| ||| |||| | | ||||| || || || || | ||||
Sbjct 865 AGACCACCAGCTAAGGTCCCAAAATAATTGTTAAGTGGAA--AAGGATGTGGGGTTGCAC 922
Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472
||||| |||||||||| |||| |||||||| ||||||| ||||||||||||| |||||||
Sbjct 923 AGACAACTAGGATGTTAGCTTAGAAGCAGCTATTCATTCAAAGAGTGCGTAATAGCTCAC 982
Query 473 TAGTCGAG 480
||||||||
Sbjct 983 TAGTCGAG 990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689451855872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |