Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq2498 170 4e-40 seq6128 91.5 3e-16 >seq2498 Length=5872 Score = 170 bits (188), Expect = 4e-40 Identities = 236/324 (73%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| |||||||||||||||||| | |||||| ||||||||| ||| ||||| | Sbjct 2465 AGTGCATCAGGTGGATGCCTTGGCGATGATAGGCGAAGAAGGACGTGTAAGCCTGCGAAA 2524 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| | |||| ||||| || |||| | ||| ||||||||||| ||||| Sbjct 2525 AGCACGGAGGAGCTGGCAAAAGAGCTGTGATACCGTGATGTCCGAATGGGGCAACCCACA 2584 Query 121 CCTTTGG--GTCATTGCATGC-TGAATACATAGGTA-TGCAAAGCGAACGCGGCGAACTG 176 | || || | ||| | | ||| |||||| | ||| |||||||| || |||||| Sbjct 2585 CAATTTATTGTGTATCCATTCCTCAATTCATAGGGAATGCGAAGCGAACCGGGAGAACTG 2644 Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 || |||||||||| | ||||||||||||||||||||||||| ||||||||||||||| Sbjct 2645 AACCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCGTAAGTAGTGGCGAGCG 2704 Query 237 AAATGGGATGAGCCTTTACGAGATAGTTGAATTGA-TAGTGGAATCCTCTGGAAATAGGA 295 ||| ||| |||| | | ||| | || | || ||| ||| |||||| Sbjct 2705 AAAGCGGAAAAGCCAGTGTGTGAT-GGTGTAGAGATTAGAAGAAAGAATTGGAAACTTCT 2763 Query 296 GCCATAGCGGGTGATAGCCCCGTA 319 |||| || |||||||||||||||| Sbjct 2764 GCCAAAGTGGGTGATAGCCCCGTA 2787 >seq6128 Length=1461 Score = 91.5 bits (100), Expect = 3e-16 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 164 ACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAA 223 |||| | ||||||||||||||||||||||||||||| ||||| ||| | |||| || | Sbjct 21 ACGCAGTGAACTGAAACATCTAAGTAGCTGCAGGAAGAGAAAGCAAAAGCGATTGCCTGA 80 Query 224 GTAGTGGCGAGCGAAATGGGATGAG 248 |||| ||||||||||| || | ||| Sbjct 81 GTAGCGGCGAGCGAAACGGCAGGAG 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918319474688