Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq2498 170 4e-40
seq6128 91.5 3e-16
>seq2498
Length=5872
Score = 170 bits (188), Expect = 4e-40
Identities = 236/324 (73%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|||||| |||||||||||||||||| | |||||| ||||||||| ||| ||||| |
Sbjct 2465 AGTGCATCAGGTGGATGCCTTGGCGATGATAGGCGAAGAAGGACGTGTAAGCCTGCGAAA 2524
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
||| | |||| ||||| || |||| | ||| ||||||||||| |||||
Sbjct 2525 AGCACGGAGGAGCTGGCAAAAGAGCTGTGATACCGTGATGTCCGAATGGGGCAACCCACA 2584
Query 121 CCTTTGG--GTCATTGCATGC-TGAATACATAGGTA-TGCAAAGCGAACGCGGCGAACTG 176
| || || | ||| | | ||| |||||| | ||| |||||||| || ||||||
Sbjct 2585 CAATTTATTGTGTATCCATTCCTCAATTCATAGGGAATGCGAAGCGAACCGGGAGAACTG 2644
Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236
|| |||||||||| | ||||||||||||||||||||||||| |||||||||||||||
Sbjct 2645 AACCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCGTAAGTAGTGGCGAGCG 2704
Query 237 AAATGGGATGAGCCTTTACGAGATAGTTGAATTGA-TAGTGGAATCCTCTGGAAATAGGA 295
||| ||| |||| | | ||| | || | || ||| ||| ||||||
Sbjct 2705 AAAGCGGAAAAGCCAGTGTGTGAT-GGTGTAGAGATTAGAAGAAAGAATTGGAAACTTCT 2763
Query 296 GCCATAGCGGGTGATAGCCCCGTA 319
|||| || ||||||||||||||||
Sbjct 2764 GCCAAAGTGGGTGATAGCCCCGTA 2787
>seq6128
Length=1461
Score = 91.5 bits (100), Expect = 3e-16
Identities = 71/85 (84%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 164 ACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAA 223
|||| | ||||||||||||||||||||||||||||| ||||| ||| | |||| || |
Sbjct 21 ACGCAGTGAACTGAAACATCTAAGTAGCTGCAGGAAGAGAAAGCAAAAGCGATTGCCTGA 80
Query 224 GTAGTGGCGAGCGAAATGGGATGAG 248
|||| ||||||||||| || | |||
Sbjct 81 GTAGCGGCGAGCGAAACGGCAGGAG 105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918319474688
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |