Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq73 477 3e-132
seq120 434 3e-119
seq37 426 5e-117
seq85 421 2e-115
seq567 398 2e-108
seq107 385 2e-104
seq62 336 7e-90
seq140 248 3e-63
seq115 228 3e-57
seq100 226 9e-57
seq12 188 2e-45
seq13 185 3e-44
seq135 161 3e-37
seq53 152 2e-34
seq286 141 3e-31
seq151 141 3e-31
seq5 138 4e-30
seq174 114 4e-23
seq159 113 1e-22
seq131 113 1e-22
seq80 111 5e-22
seq308 107 6e-21
seq329 104 8e-20
seq25 98.7 3e-18
seq136 96.9 1e-17
seq296 95.1 4e-17
seq125 95.1 4e-17
seq91 95.1 4e-17
seq42 95.1 4e-17
seq234 86.0 2e-14
seq40 86.0 2e-14
seq192 84.2 7e-14
seq17 84.2 7e-14
seq128 82.4 2e-13
seq94 82.4 2e-13
seq93 82.4 2e-13
seq1 82.4 2e-13
>seq73
Length=16158941
Score = 477 bits (528), Expect = 3e-132
Identities = 285/299 (95%), Gaps = 0/299 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 13202526 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 13202585
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 13202586 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 13202645
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 13202646 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 13202705
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13202706 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 13202765
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 13202766 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACATC 13202824
>seq120
Length=11273949
Score = 434 bits (480), Expect = 3e-119
Identities = 303/345 (88%), Gaps = 11/345 (3%)
Strand=Plus/Plus
Query 190 AGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTC 249
||| |||||||||| || |||||||||||||| ||| | ||||||||||
Sbjct 262249 AGTGAAAAAACGATCAGACTAGTGGTATTTCACCAGCGGC----------CCACTTATTC 262298
Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309
| ||||||||| ||| ||||| | | ||| |||||||||||||||||||||||||||
Sbjct 262299 TGCACCTCTCATGTCTCTTCACCGTGCCAGACCAGAGTCAAGCTCAACAGGGTCTTCTTT 262358
Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369
|||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||
Sbjct 262359 CCCCGCTGATTCCGCCAAGCACGTTCCCTTGTCTGTGGTTTCGCTGGATAGTAGGTAGGG 262418
Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429
||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 262419 ACAGTGGGAATCTCGCTCATCCATTCATGCGCGTCACTAATTAGATGACGAAGCATTTGG 262478
Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCG-CCGTTTACCCGCGCTTGGTTGAATTTCTTC 488
||||||||||||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct 262479 CTACCTTAAGAGAGTCATAGTTACTCCCGCCCGTTTACGCGTGCTTCATTGAATTTCTTC 262538
Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 262539 ACTTTGACATTCAGAGCACTGGGCAGAAATCGCATCACGTCAACA 262583
>seq37
Length=21211568
Score = 426 bits (472), Expect = 5e-117
Identities = 247/254 (97%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16650024 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 16649965
Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399
||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 16649964 GGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGC 16649905
Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 16649904 GCGTCACTAATTAGATGACGAGGCTTTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 16649845
Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 16649844 CGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 16649785
Query 520 ACATTGCGTCAACA 533
|||| |||||||||
Sbjct 16649784 ACATCGCGTCAACA 16649771
>seq85
Length=15026860
Score = 421 bits (466), Expect = 2e-115
Identities = 271/296 (92%), Gaps = 0/296 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||| ||||||||| ||||||| ||| |||||| | | ||||| ||||||||||||
Sbjct 3835353 CTCCCAATTATTCTACTCCTCTCATGTCTTTTCACCGTGCCAGACTATAGTCAAGCTCAA 3835294
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||| |||||||||||||||||||||||||||| | ||||| |||||||||||| | |
Sbjct 3835293 CAGGGTGTTCTTTCCCCGCTGATTCCGCCAAGCCCATCCCCTTTGCTGTGGTTTCGATGG 3835234
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 3835233 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCCCGTCACTAATTAGATG 3835174
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 3835173 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGATACTCCCGCCATTTACCCGCGCTTCA 3835114
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3835113 CTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAAC 3835058
>seq567
Length=286087
Score = 398 bits (440), Expect = 2e-108
Identities = 267/297 (90%), Gaps = 1/297 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||| ||||| ||| ||||| | | | ||||||||| ||| ||||
Sbjct 157093 CTCCCACTTATTCTACACGTCTCATGTCTCTTCACCATGCCAGACTAGAGTGAAGTTCAA 157152
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||| | ||||||||| ||||||||||||||| || ||| |
Sbjct 157153 CAGGGTCTTCTTTCCCCGCTGATCCTGCCAAGCCCATTCCCTTGGCTGTGGGTTTGCTGG 157212
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 157213 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGCGCGTCACTAATTAGATG 157272
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
| ||||||||||||||||||||||||||||||||||||||| || |||||| || |||
Sbjct 157273 ATGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-CCATTTACCTGCACTTCA 157331
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct 157332 TTGAATTTCTTCATTTTGACATTCAGAGCACTGGACAGAAATCACATCACGTCAACA 157388
>seq107
Length=12465781
Score = 385 bits (426), Expect = 2e-104
Identities = 259/287 (90%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| |||| | | ||||||||||||||||||
Sbjct 6124496 CTCCCACTTATTCTACACCTCTCATGTCTCTTCATCGTGCCAGACTAGAGTCAAGCTCAA 6124437
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||| |||||||| | |||||||| |||||||| |||||||||||||||||||||| |
Sbjct 6124436 CAGGGTGTTCTTTCCTCACTGATTCC-CCAAGCCCTTTCCCTTGGCTGTGGTTTCGCTGG 6124378
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||||||||| ||||||||||| |||||||||||| | ||||||||||||||
Sbjct 6124377 ATAGTAGGTAGGGACAGCAGGAATCTCGTTTATCCATTCATGCACATCACTAATTAGATG 6124318
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
| || |||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 6124317 ATGACGCATTTGGCTTCCTTAAGAGAGTC--AGTTACTCCCGCCGTTTACCCGCGCTTCA 6124260
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6124259 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 6124213
>seq62
Length=17307623
Score = 336 bits (372), Expect = 7e-90
Identities = 258/300 (86%), Gaps = 8/300 (3%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||| |||||| | ||| ||||| | | || |||||||||||||||
Sbjct 4106154 CTCCCACTTATTCTTCACCTC--ATGTCTCTTCACGGTGCCAGAATAGAGTCAAGCTCAA 4106097
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC-TA 355
||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||| ||
Sbjct 4106096 CAGAGTCTTCTTTCCCTGCTGATTTTGCCAAGCCTGTTCCCTTGGCTGTGGTTTCGCCTA 4106037
Query 356 GATAGTAGATAGGGACAGTGGGAA-TCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
|| ||||||||||||| |||||| ||| ||| ||||||||||| || ||||||||||||
Sbjct 4106036 CATTGTAGATAGGGACAATGGGAAATCTTGTTCATCCATTCATGTGCATCACTAATTAGA 4105977
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGT-CATAGTTACTCCCGCCGTTTACCCGCGCT 473
||| ||||||||||||| |||||||| | |||| |||||||| | ||| | || ||||
Sbjct 4105976 TGATGAGGCATTTGGCT---TTAAGAGACTTCATATTTACTCCCACTGTTCATCCACGCT 4105920
Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 4105919 TCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAGTCACATTGCATCAACA 4105860
Score = 188 bits (208), Expect = 2e-45
Identities = 157/192 (82%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401
|| ||||||| || |||||||| |||||| |||||||||| || |||| |||||| |
Sbjct 5884024 CTATGGTTTCACTGGATAGTAGGTAGGGATGGTGGGAATCTTATTCATCCTTTCATGTGT 5883965
Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461
|||||||| |||||||||| ||| ||||||||||| | ||||| ||||||||| ||
Sbjct 5883964 GTCACTAAGTAGATGACGAAGCAAGTGGCTACCTTACTTGTGTCATGGTTACTCCCACCA 5883905
Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521
|||||| |||| | |||||||| |||||||||||||||||||||||| || |||| ||
Sbjct 5883904 TTTACCTGCGCATCACTGAATTTCCTCACTTTGACATTCAGAGCACTGGACAAAAATTAC 5883845
Query 522 ATTGCGTCAACA 533
|| | ||||||
Sbjct 5883844 ATCACATCAACA 5883833
>seq140
Length=9011174
Score = 248 bits (274), Expect = 3e-63
Identities = 170/192 (89%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 318 ATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGG 377
||||| |||||||| |||| ||||||||||||| ||| |||||||||||||||||| |||
Sbjct 791275 ATTCCACCAAGCCCATTCCTTTGGCTGTGGTTTTGCTGGATAGTAGATAGGGACAGAGGG 791216
Query 378 AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA 437
||| || || |||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 791215 AATTTCATTCCTCCATTCATGCGTGTCACTAATTAGATGACTAGGCATTTGGCTACCTTA 791156
Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497
|||||||| |||||||||| ||| ||||| || |||| |||||||||||| ||||| ||
Sbjct 791155 AGAGAGTCTTAGTTACTCCTGCCCTTTACTCGTGCTTCATTGAATTTCTTCTCTTTGGCA 791096
Query 498 TTCAGAGCACTG 509
|||| |||||||
Sbjct 791095 TTCAAAGCACTG 791084
>seq115
Length=11006431
Score = 228 bits (252), Expect = 3e-57
Identities = 170/199 (85%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308
|||||||||||| ||| |||| | | ||||| | |||||||||| |||||||||||
Sbjct 1681042 CTACACCTCTCATGTCTCTTCATCGTGCCAGACTACACTCAAGCTCAAAAGGGTCTTCTT 1680983
Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368
| |||||||| || ||||||| | |||||||||||||||||| ||| | ||||| ||||
Sbjct 1680982 TGCCCGCTGAGTCTGCCAAGCTCCTTCCCTTGGCTGTGGTTTTGCTGGTGAGTAGGTAGG 1680923
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||||||||||| | || ||||||||||||| ||| | |||||||||||||||||||||
Sbjct 1680922 GACAGTGGGAATCACCTTCATCCATTCATGCGTGTCCCGAATTAGATGACGAGGCATTTG 1680863
Query 429 GCTACCTTAAGAGAGTCAT 447
||||||||||||||||||
Sbjct 1680862 CCTACCTTAAGAGAGTCAT 1680844
Score = 113 bits (124), Expect = 1e-22
Identities = 83/97 (86%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496
||||||||||||| |||||||||||||| || |||| ||||||||||||||||
Sbjct 1680682 AAGAGAGTCATAGATACTCCCGCCGTTTTCCTATGCTTCACGTAATTTCTTCACTTTGAG 1680623
Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||| | |||||
Sbjct 1680622 ATTCAGAGCACTGGGCAGAAATCACATTCCAGCAACA 1680586
>seq100
Length=13397247
Score = 226 bits (250), Expect = 9e-57
Identities = 178/213 (84%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTC 383
|||||| ||||||||||||||||||| ||| |||||| | ||||||||||||| |||||
Sbjct 99825 CCAAGCTTGTTCCCTTGGCTGTGGTTTTGCTGGATAGTGGGTAGGGACAGTGGGCATCTC 99884
Query 384 GTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG 443
|| ||| ||||||| | | ||||||||||||| | |||| | ||||| |||||||||
Sbjct 99885 TTTTGTCCTTTCATGCTCATAACTAATTAGATGAGGCGGCAGCTAGCTACGTTAAGAGAG 99944
Query 444 TCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGA 503
|||||||| |||| ||| ||||||| |||| |||||||||||||||||||||||| ||
Sbjct 99945 TCATAGTTTCTCCTGCCATTTACCCATGCTTCATTGAATTTCTTCACTTTGACATTCGGA 100004
Query 504 GCACTGGGCAGAAATCACATTGCGTCAACATCA 536
||| |||||| ||||||||| | | |||| ||
Sbjct 100005 GCAGTGGGCACAAATCACATCACCTTAACACCA 100037
>seq12
Length=32874669
Score = 188 bits (208), Expect = 2e-45
Identities = 203/268 (76%), Gaps = 3/268 (1%)
Strand=Plus/Plus
Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326
||||| | | | || |||||||||| ||||| |||| |||||| ||||| || |||
Sbjct 35347 TTCACCACGCCAGATTAGAGTCAAGATCAACTGGGTTTTCTTTTTGTACTGATCCCACCA 35406
Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386
| || ||||||| |||||||||| | || ||||| ||||| || | | ||||||| |||
Sbjct 35407 AACCTGTTCCCTGGGCTGTGGTTGCACTGAATAGTTGATAGAGAAAATAGGAATCTTGTT 35466
Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446
| || | || ||||||||||| |||| ||| || |||||| |||| ||| ||
Sbjct 35467 ---CTATGTAAGCATGTCACTAATTAAATGATGAGCTATATGGCTATGTTAAAAGAAACA 35523
Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506
||||||| | | ||||| | ||| || ||||||||||||||| ||||||||| |
Sbjct 35524 TAGTTACATCTAACATTTACTTGTACTTTATTAAATTTCTTCACTTTGGCATTCAGAGAA 35583
Query 507 CTGGGCAGAAATCACATTGCGTCAACAT 534
||||| ||||||||||||| |||||||
Sbjct 35584 CTGGGAGGAAATCACATTGCATCAACAT 35611
>seq13
Length=33189687
Score = 185 bits (204), Expect = 3e-44
Identities = 107/110 (97%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 11370173 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATT 11370114
Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 11370113 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 11370064
>seq135
Length=9491747
Score = 161 bits (178), Expect = 3e-37
Identities = 127/151 (84%), Gaps = 1/151 (1%)
Strand=Plus/Minus
Query 379 ATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAA 438
|||| ||| ||||||||| || | ||||||||||||||||||||||||||| |||||||
Sbjct 5409154 ATCTTGTTCATCCATTCACGCATGCCACTAATTAGATGACGAGGCATTTGGCCACCTTAA 5409095
Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498
| |||| ||||||||| | || ||||||| |||| ||| ||||||||||||| |||
Sbjct 5409094 GTGAGTTATAGTTACT-CTGCTGTTTACCTATGCTTCATTGGATTTCTTCACTTTCACAA 5409036
Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTC 529
|||| ||||||||||||||||||| | |||
Sbjct 5409035 TCAGGACACTGGGCAGAAATCACATCGTGTC 5409005
>seq53
Length=18565151
Score = 152 bits (168), Expect = 2e-34
Identities = 101/112 (90%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
|||||||||||||||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 14732821 ACTTATTCTACACCTCTCGTGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAACAGGG 14732880
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 14732881 TCTTCTTTCCCCGCTGATTCCACCAAGCCCGTTCCCTTGTCTGTGGTTTCGC 14732932
>seq286
Length=3233792
Score = 141 bits (156), Expect = 3e-31
Identities = 136/173 (79%), Gaps = 1/173 (1%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
|||| |||| || ||||||||||| | || |||||||| | ||||||||| |||||
Sbjct 812012 AGTACATAGTGAATGTGGGAATCTCATGCATTCATTCATGTACATCACTAATTTGATGAT 812071
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
|||||||||| ||||| |||||||||||||| |||||| ||||||| | ||| ||
Sbjct 812072 GAGGCATTTGACTACCATAAGAGAGTCATAGACACTCCCACCGTTTATCTATACTTCATT 812131
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
|||||||||| | |||| ||||| | || ||| |||||||||| |||||
Sbjct 812132 GAATTTCTTCCCATTGATATTCAAAACA-GAGGCTGAAATCACATAATGTCAA 812183
>seq151
Length=7800450
Score = 141 bits (156), Expect = 3e-31
Identities = 108/126 (86%), Gaps = 5/126 (4%)
Strand=Plus/Plus
Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326
||||| ||| |||||||||||||||||||||||| |||||| |||||||| ||||
Sbjct 757097 TTCACTCTGTCAGACTAGAGTCAAGCTCAACAGGGT----TTTCCCTGCTGATTCTGCCA 757152
Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386
||||| |||||||||||| |||||| || |||||||| ||||||||||||||||| | ||
Sbjct 757153 AGCCCCTTCCCTTGGCTGGGGTTTCACT-GATAGTAGGTAGGGACAGTGGGAATCACATT 757211
Query 387 AATCCA 392
|||||
Sbjct 757212 CATCCA 757217
>seq5
Length=38686854
Score = 138 bits (152), Expect = 4e-30
Identities = 117/146 (80%), Gaps = 20/146 (14%)
Strand=Plus/Minus
Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412
|| |||||||| ||||| ||||||||||||| || ||||||||||
Sbjct 11852958 CTGGATAGTAGGTAGGGGCAGTGGGAATCTC--TA---------------TCACTAATTA 11852916
Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472
||| |||| ||||||||||||||||||||||||||||||||||| ||||||| || ||
Sbjct 11852915 GATAACGAAGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGCCGTTT---CGTGC 11852859
Query 473 TTGGTTGAATTTCTTCACTTTGACAT 498
|| ||||||||||||||||||||||
Sbjct 11852858 TTCATTGAATTTCTTCACTTTGACAT 11852833
>seq174
Length=7193624
Score = 114 bits (126), Expect = 4e-23
Identities = 103/129 (80%), Gaps = 3/129 (2%)
Strand=Plus/Plus
Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 444
|| ||||||||| | | || ||||||| ||||||||||||||||||||||||||
Sbjct 514207 TTCATCCATTCACACACAACAGTAATTAGCAATTGAGGCATTTGGCTACCTTAAGAGAGT 514266
Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC---ACTTTGACATTCA 501
||| |||||| | || |||||||| | ||| ||| |||||||| |||||||||||||
Sbjct 514267 CATGGTTACTTCTGCAGTTTACCCACACTTCATTGCATTTCTTCTTTACTTTGACATTCA 514326
Query 502 GAGCACTGG 510
|| || |||
Sbjct 514327 GAACAGTGG 514335
>seq159
Length=7927985
Score = 113 bits (124), Expect = 1e-22
Identities = 89/107 (83%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 1786269 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 1786328
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| ||||||||| ||||||||||| ||| || ||||
Sbjct 1786329 GTTTGACAGGTGTACCGCCCCAGGCAAACTCCCCAACTGGCACTGTC 1786375
>seq131
Length=9598865
Score = 113 bits (124), Expect = 1e-22
Identities = 76/85 (89%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508
|||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 5217096 GTTACTCCCGCCATTTACCTGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACT 5217155
Query 509 GGGCAGAAATCACATTGCGTCAACA 533
|||||||||||| | |||||||
Sbjct 5217156 AGGCAGAAATCACGTCCAGTCAACA 5217180
>seq80
Length=14032783
Score = 111 bits (122), Expect = 5e-22
Identities = 70/76 (92%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 456 CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 515
|||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 11893503 CCGCCGTTTACCCGTGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 11893444
Query 516 AATCACATTGCGTCAA 531
|||||||| || |||
Sbjct 11893443 AATCACATCACGCCAA 11893428
>seq308
Length=2727758
Score = 107 bits (118), Expect = 6e-21
Identities = 88/107 (82%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| |||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 2498119 CTTCTGCTACACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 2498060
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| ||||||||| ||||||||||| ||| || ||||
Sbjct 2498059 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCATCTGGCACTGTC 2498013
>seq329
Length=2306463
Score = 104 bits (114), Expect = 8e-20
Identities = 79/92 (86%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499
||||||| | ||||||| || || ||||| ||||| |||||||||||||||||||||||
Sbjct 1718123 AGAGTCAAACTTACTCCTGCTGTCTACCCACGCTTCCTTGAATTTCTTCACTTTGACATT 1718182
Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
|||||||||||||| |||| || || |||||
Sbjct 1718183 CAGAGCACTGGGCAAAAATTGCACTG-GTCAA 1718213
>seq25
Length=24566998
Score = 98.7 bits (108), Expect = 3e-18
Identities = 80/96 (83%), Gaps = 2/96 (2%)
Strand=Plus/Plus
Query 440 AGAGTCATAGTTACTCCCGCCGTTT--ACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497
||| ||||| ||| || ||||||| ||| ||||| |||||||| |||||||||||
Sbjct 15601920 AGATTCATAATTAGTCTTGCCGTTTTTACCTACGCTTCATTGAATTTTCTCACTTTGACA 15601979
Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||| ||||| |||||||||||||| |||||||
Sbjct 15601980 TTCAGAGAACTGGACAGAAATCACATTGTGTCAACA 15602015
>seq136
Length=9721599
Score = 96.9 bits (106), Expect = 1e-17
Identities = 83/103 (81%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 11 TGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTT 70
||||| | |||| ||||||| || | |||| | ||||||||||||||| ||| |||
Sbjct 3072021 TGCTCCATGGGAGGTTTCTGTCCTGCCTGAGCTCGCCTTAGGACACCTGCTTTACCATTT 3071962
Query 71 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| ||| ||||||||| ||||||||||||||| || ||||
Sbjct 3071961 GACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 3071919
>seq296
Length=2855797
Score = 95.1 bits (104), Expect = 4e-17
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 392 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 88121 ATTCATGCACATCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 88177
>seq125
Length=10188790
Score = 95.1 bits (104), Expect = 4e-17
Identities = 94/122 (77%), Gaps = 5/122 (4%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| | ||| | |||| ||||||| ||| |||| |||| |||||||||||||
Sbjct 5667800 CTTCTACTCCATGGGAGGTTTCTGTCCTCTCTGAGCTGGCCTTGAGACACCTGCGTTACC 5667859
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| ||||||||
Sbjct 5667860 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGATC 5667914
Query 127 GG 128
||
Sbjct 5667915 GG 5667916
>seq91
Length=13036445
Score = 95.1 bits (104), Expect = 4e-17
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | || | ||||||||||||
Sbjct 7773401 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCGTCCTACACCTGCGTTACC 7773460
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| ||||||||| |||| |||||||||| || ||||
Sbjct 7773461 GTTTGACAGGTGTACCGCCCCAGTCAAATTCCCCACCTGGCACTGTC 7773507
>seq42
Length=20800813
Score = 95.1 bits (104), Expect = 4e-17
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| |||||| ||||||| |||| |||| | ||||||||||||||| |||
Sbjct 12921399 CTTCTGCTCCACAGGACGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCATTACC 12921340
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| | | || ||||| ||||||||||||||| || ||||
Sbjct 12921339 ATTTGACAGGTATACCAACCCAGTCAAACTCCCCACCTGGCACTGTC 12921293
>seq234
Length=4826317
Score = 86.0 bits (94), Expect = 2e-14
Identities = 75/93 (81%), Gaps = 9/93 (10%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct 4539953 CTCCCACTTATTCTACACCTCTCAAGTCTCTTCACTGTGTCAGACTAGAGTCAAGCTC-- 4539896
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGC 329
|||||| || ||||||||| ||||||
Sbjct 4539895 ------TTTCTTT-CCTGCTGATTCCACCAAGC 4539870
>seq40
Length=21071559
Score = 86.0 bits (94), Expect = 2e-14
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| ||||||| ||||||||||| |||| | |||||||||||||| |||
Sbjct 5857885 CTTCTGCTCCACAGGAGGCTTCTGTTCTCCCTGAGCTCAACTTAGGACACCTGCATTACC 5857826
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||| || | |||| ||| ||||| || || || ||||
Sbjct 5857825 ATTTGACAGTTGTACCTCTCCAGTCAAGCTCCCTACGTGGCAGTGTC 5857779
>seq192
Length=6380414
Score = 84.2 bits (92), Expect = 7e-14
Identities = 98/131 (75%), Gaps = 1/131 (1%)
Strand=Plus/Plus
Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300
||||||||||||||| ||| ||| ||||| | | | || ||||| |||| ||||||
Sbjct 1261985 CACTTATTCTACACCCCTCCTGTCTCTTCACCATGCCAGATTAGAGGGAAGCCCAACAGT 1262044
Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 360
||||||||| || |||||| | ||||| | |||||||| |||| || |||||
Sbjct 1262045 GTCTTCTTTTGCC-ATGATTCTACTAAGCCTAATTTCTTGGCTGAAGTTTAGCAGGATAG 1262103
Query 361 TAGATAGGGAC 371
|| |||||||
Sbjct 1262104 GAGGTAGGGAC 1262114
>seq17
Length=30399006
Score = 84.2 bits (92), Expect = 7e-14
Identities = 99/133 (74%), Gaps = 1/133 (1%)
Strand=Plus/Minus
Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
||||| ||| |||||||| |||| ||||||| ||||| ||| ||||| || | | |
Sbjct 23122447 GACTACAGTTAAGCTCAATAGGGCTGGCTTTCCCTGCTGACTCCACCAAGTCCATGCTGT 23122388
Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398
|||||||| | | || | || || ||||||||||| ||||| | | ||||||| |||
Sbjct 23122387 TGGCTGTGATCTTACTGGGTAATATC-AGGGACAGTGGAAATCTTGGTTATCCATTTATG 23122329
Query 399 CGCGTCACTAATT 411
| ||| |||||
Sbjct 23122328 TGTATCAATAATT 23122316
Score = 75.2 bits (82), Expect = 4e-11
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand=Plus/Minus
Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327
|||||| ||| |||||||||||| |||||||||||| | ||| ||| |||||| | ||||
Sbjct 1742833 TCACAA-GTCAGACTAGAGTCAAACTCAACAGGGTCCTTTTTACCCACTGATTTCACCAA 1742775
Query 328 GCCCGTTC 335
||| ||||
Sbjct 1742774 GCCTGTTC 1742767
>seq128
Length=10337057
Score = 82.4 bits (90), Expect = 2e-13
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
|||||| || |||| || |||||||||||||||| ||||||||| ||||||||||||||
Sbjct 9343073 GTTTACACGTGCTTCATTAAATTTCTTCACTTTGAAATTCAGAGCGCTGGGCAGAAATCA 9343014
Query 521 CAT 523
|||
Sbjct 9343013 CAT 9343011
>seq94
Length=13213440
Score = 82.4 bits (90), Expect = 2e-13
Identities = 47/48 (98%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 11602833 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGAGTCAACA 11602786
>seq93
Length=13294943
Score = 82.4 bits (90), Expect = 2e-13
Identities = 77/97 (79%), Gaps = 1/97 (1%)
Strand=Plus/Minus
Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420
|||| | |||||||| |||| || || ||| | | | | | ||||| | ||||||| ||
Sbjct 11863789 TAGAAAAGGACAGTGAGAAT-TCATTCATCTACTTACGTGAATCACTGAGTAGATGATGA 11863731
Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457
||||||||||||||||||||||| |||| ||||||
Sbjct 11863730 GGCATTTGGCTACCTTAAGAGAGCTGTAGTAACTCCC 11863694
>seq1
Length=49259779
Score = 82.4 bits (90), Expect = 2e-13
Identities = 78/98 (80%), Gaps = 4/98 (4%)
Strand=Plus/Minus
Query 407 TAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC-CGTTTA 465
||| ||||||| | |||||| ||| |||||||||||||| ||| ||| | ||||
Sbjct 15336211 TAACTAGATGATG---CATTTGACTATCTTAAGAGAGTCATGGTTCCTCATAAACATTTA 15336155
Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGA 503
||| | ||| |||||||||||||||||||| ||||||
Sbjct 15336154 CCCACACTTCATTGAATTTCTTCACTTTGACGTTCAGA 15336117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635056625664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |