Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq2498 210 5e-52
>seq2498
Length=5872
Score = 210 bits (232), Expect = 5e-52
Identities = 219/285 (77%), Gaps = 7/285 (2%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACA--AGCTCCCACAC 58
||||||||||||| ||||||||| ||||||||| || ||||| || || || | |
Sbjct 855 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTATGGTACCGTCATCAGAGCCAGCTC 796
Query 59 GTGGAAGGTT----TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114
| | | || ||||| || ||||| | ||||||||||| ||| ||||| || |
Sbjct 795 TTAACCAGCTCATCTTCTTCCCATACAAAAGTACTTTACAATCCGAAGA-CCTTCTTCAT 737
Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174
||||| | ||||||| |||| | | |||||| |||| ||||| ||||||||||||
Sbjct 736 ACACGCGGCATGGCTGGATCAGGGTTCCCCCCATTGTCCAAAATTCCCCACTGCTGCCTC 677
Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234
|||||||||| ||| |||||||||||| ||| ||||| ||| | |||||||||| || ||
Sbjct 676 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCGGATCATCCTCTCAGACCCGCT 617
Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| ||||| |||| ||| |||| ||||||| || ||||||||||
Sbjct 616 ACTGATCGTCGGCTTGGTAGGCCTTTACCCCACCAACTACCTAAT 572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068706287616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |