Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq2498 210 5e-52 >seq2498 Length=5872 Score = 210 bits (232), Expect = 5e-52 Identities = 219/285 (77%), Gaps = 7/285 (2%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACA--AGCTCCCACAC 58 ||||||||||||| ||||||||| ||||||||| || ||||| || || || | | Sbjct 855 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTATGGTACCGTCATCAGAGCCAGCTC 796 Query 59 GTGGAAGGTT----TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | | | || ||||| || ||||| | ||||||||||| ||| ||||| || | Sbjct 795 TTAACCAGCTCATCTTCTTCCCATACAAAAGTACTTTACAATCCGAAGA-CCTTCTTCAT 737 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | ||||||| |||| | | |||||| |||| ||||| |||||||||||| Sbjct 736 ACACGCGGCATGGCTGGATCAGGGTTCCCCCCATTGTCCAAAATTCCCCACTGCTGCCTC 677 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234 |||||||||| ||| |||||||||||| ||| ||||| ||| | |||||||||| || || Sbjct 676 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCGGATCATCCTCTCAGACCCGCT 617 Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | ||||| |||| ||| |||| ||||||| || |||||||||| Sbjct 616 ACTGATCGTCGGCTTGGTAGGCCTTTACCCCACCAACTACCTAAT 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068706287616