Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq25 271 2e-70
seq43 181 3e-43
seq124 176 1e-41
seq22 172 2e-40
seq18 132 1e-28
seq217 111 5e-22
seq411 102 2e-19
seq110 98.7 3e-18
seq48 98.7 3e-18
seq496 96.9 1e-17
seq129 89.7 2e-15
seq118 89.7 2e-15
seq427 87.8 5e-15
seq98 80.6 8e-13
seq363 77.0 1e-11
seq63 75.2 3e-11
seq1 75.2 3e-11
>seq25
Length=24566998
Score = 271 bits (300), Expect = 2e-70
Identities = 203/237 (86%), Gaps = 1/237 (0%)
Strand=Plus/Plus
Query 2 TACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| | || | |||||| ||||||| ||||| | |||||| |||
Sbjct 9122719 TACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTGCCT 9122778
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9122779 CCCGGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 9122838
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| ||||||||| || ||| | |||||||||
Sbjct 9122839 TCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACACGTGGTCACCATGGTA 9122898
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
||| |||||||||||||||||||||||||| || ||||| | ||||||
Sbjct 9122899 GGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCG 9122955
>seq43
Length=20637118
Score = 181 bits (200), Expect = 3e-43
Identities = 125/140 (89%), Gaps = 1/140 (1%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 20627409 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 20627468
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 20627469 CCCAGGTCGGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 20627528
Query 122 CTCAGGCTCCCTCTCCGGAA 141
|||||||||||||||| |||
Sbjct 20627529 CTCAGGCTCCCTCTCCAGAA 20627548
>seq124
Length=10580691
Score = 176 bits (194), Expect = 1e-41
Identities = 119/132 (90%), Gaps = 1/132 (1%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
||||||| |||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 5824821 ACTCATTACAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 5824880
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5824881 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 5824940
Query 122 CTCAGGCTCCCT 133
||||||||||||
Sbjct 5824941 CTCAGGCTCCCT 5824952
>seq22
Length=26541223
Score = 172 bits (190), Expect = 2e-40
Identities = 150/184 (82%), Gaps = 3/184 (2%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTG--TCACTACC 59
|||||||||||||||| | | |||||||| ||| | | ||||| || ||||||||
Sbjct 16432464 ACTCATTCCAATTACAGGGCTTCAAAAGAGTCCTATTTTGTTATTTTTTTCATCACTACC 16432405
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||| | || | || |||||||||||| | || ||||||||||||||||||||||||| |
Sbjct 16432404 TCCCAGGGTTGAGAGTGGGTAATTTGCACACCAGCTGCCTTCCTTGGATGTGGTAGCCAT 16432345
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|||||||| ||||||||| |||| ||||||| ||||||||| |||| | | || ||||
Sbjct 16432344 TTCTCAGGGTCCCTCTCCAGAATTGAACCCTGATTCCCCGTCACCCATGGTCTCCGTGGT 16432285
Query 180 AGGC 183
||||
Sbjct 16432284 AGGC 16432281
>seq18
Length=31040741
Score = 132 bits (146), Expect = 1e-28
Identities = 96/110 (87%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454
|||| ||| ||||||||||||||||||||||||||||||||||||| | | |
Sbjct 23147970 CAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGAA 23148029
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 23148030 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 23148078
>seq217
Length=4845695
Score = 111 bits (122), Expect = 5e-22
Identities = 125/165 (76%), Gaps = 7/165 (4%)
Strand=Plus/Minus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-----AGGTACT-ATCAAA 398
|| || ||||||||||||||||||| |||||||| || | || | | | ||||
Sbjct 4792132 CAAGTGTTAGCTCTAGAATTACCACAGTTATCCAAAAAGGAGAGGGAGCCAGTGACCAAA 4792073
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458
||| |||||||||||||||||||| ||| |||||||||| | | |||| |||
Sbjct 4792072 GGAACTGAAACTGATTTAATGAGCCATTTGCATTTTCACTGTACTGGCTCTGTATAATTA 4792013
Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
|||| ||| ||||||||||||||||| ||||| |||||| ||
Sbjct 4792012 CACATATATGAATTAATCTTTGAGACAAGTATATG-CTACTGACA 4791969
>seq411
Length=1305653
Score = 102 bits (112), Expect = 2e-19
Identities = 126/166 (76%), Gaps = 10/166 (6%)
Strand=Plus/Plus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGT----AAGGTACT-ATCAAAT 399
||| ||||| ||||||||||||||| |||| | | ||||| ||| | | | ||||
Sbjct 348152 CATATATTATCTCTAGAATTACCACAGTTAACAAAGTAGTCAAGAAGCCAGTGACCAAAG 348211
Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC-TTA 458
||| | || |||||||||||||||| ||||| ||||||| | | | | | |||
Sbjct 348212 GAACAA-AATGGATTTAATGAGCCATTAGCAGTGCCACTGTACTGGC--CCTGTGCATTA 348268
Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||| |||||||| |||| |||| ||||||| ||
Sbjct 348269 GACATGCATGGCTTAGCCTTTGAGATAAGCGTATG-CTACTGGTAG 348313
>seq110
Length=12197893
Score = 98.7 bits (108), Expect = 3e-18
Identities = 88/107 (82%), Gaps = 5/107 (5%)
Strand=Plus/Plus
Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT--ATA 454
||| | | |||||||||||||||||||||| | |||||||| |||| | ||| ||
Sbjct 2559781 AATGATCCATAACTGATTTAATGAGCCATTTGTAGTTTCAC--TATACCTGCCTTTCGTA 2559838
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501
||||||| ||||||||||||||||||||||| |||| ||||||||
Sbjct 2559839 ATTAGACACGCATGGCTTAATCTTTGAGACAAATATAT-ACTACTGG 2559884
>seq48
Length=18110590
Score = 98.7 bits (108), Expect = 3e-18
Identities = 127/167 (76%), Gaps = 10/167 (6%)
Strand=Plus/Plus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAAATAAA 402
||||||||| || ||| |||||| || |||| ||| || | || || | ||| ||
Sbjct 3275 GCATGTATTGGCCCTAAAATTACTACAGTTAACCAATTAAGAGAGAAACCAGCAACCAAG 3334
Query 403 CGA---TA-ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA-TACTT 457
| | || | ||||||||| || ||||| |||||||||| || | || | |||||
Sbjct 3335 CAAACCTACAGTGATTTAATAAGTCATTCTCAGTTTCACTCTACTGGCA-CTGAGTACTT 3393
Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct 3394 AGACATGCATGGCTTAATC--TGAGATAAGCATATG-CTACTGGCAG 3437
>seq496
Length=575732
Score = 96.9 bits (106), Expect = 1e-17
Identities = 116/155 (75%), Gaps = 6/155 (4%)
Strand=Plus/Minus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG----TAAG-GTACTATCAAAT 399
||||||||||||||||||||| ||| |||||||| ||| ||| | | ||||
Sbjct 533908 CATGTATTAGCTCTAGAATTATCACAGTTATCCAAATAGGCGAGAAGCCAAAGACCAAAG 533849
Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459
||| | |||||||||||||| ||||| || ||||||| | || | | || ||||
Sbjct 533848 GAACCAAAACTGATTTAATGATCCATTTACA-ATTCACTGGACAGGCTCTGTGTAATTAG 533790
Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGA 494
||||||| || |||||||| ||||||| | ||||
Sbjct 533789 ACATGCACGGATTAATCTTGGAGACAAAGAGATGA 533755
Score = 78.8 bits (86), Expect = 3e-12
Identities = 123/174 (71%), Gaps = 13/174 (7%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||||| || | |||||| ||||| | | ||||| |||||
Sbjct 534756 ACTCATTCCAATTACAAGGCCTCCAAAGAGTCCTGTTTTA----TTATTTTCACT----- 534706
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
| ||| || | ||||| |||| | ||||| ||| |||||||| ||||| | ||
Sbjct 534705 --TGGGTCAGGTGTAGGTAAGTTGCACCTCTGCTAATTTCTTTGGATGTAGTAGCTG-TT 534649
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCA 175
| ||| |||||||| | | | ||| || |||||| | |||| || | ||||
Sbjct 534648 CCAAGGTTCCCTCTCTGATAGCCAACTCTCATTCCCTGCCACCCCTTCACACCA 534595
>seq129
Length=9290576
Score = 89.7 bits (98), Expect = 2e-15
Identities = 148/206 (72%), Gaps = 12/206 (6%)
Strand=Plus/Minus
Query 301 tttttATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGC-ATGTATTAGCTCTA 359
|||| |||| |||||| ||| | ||||| |||| || ||| | || ||| |||||
Sbjct 8286521 TTTTGATCTGATAAATGCACACATTCCGGCAAAGGGGATT--AGCCACGTGTTAACTCTA 8286464
Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
||| |||||| || | ||| |||| | | | | |||| ||| || ||| ||| |||
Sbjct 8286463 GAACTACCACAGTCACCCAAGTAGGAGAGGAG-ACCAAAGGAACCGTAGCTGCTTTCATG 8286405
Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTAT-ACTTAGACATGCATGGCTTAATCTT 478
|| | ||||||| ||||||| | || || | ||||||||| ||| || | |
Sbjct 8286404 AGTCGTTCGCAGCTTCACTGGACAGGCC-CTGAGCACTTAGACA-----GGCCTAGTTTC 8286351
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||| ||||||||||
Sbjct 8286350 TGAGACAAGCATATG-CTACTGGCAG 8286326
>seq118
Length=10455207
Score = 89.7 bits (98), Expect = 2e-15
Identities = 71/84 (85%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||
Sbjct 9005379 TACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCT 9005320
Query 61 CCCCGTGTCGGGATTGGGTAATTT 84
||||| ||||||| ||||||| ||
Sbjct 9005319 CCCCGGGTCGGGAGTGGGTAAGTT 9005296
>seq427
Length=1103182
Score = 87.8 bits (96), Expect = 5e-15
Identities = 114/155 (74%), Gaps = 6/155 (4%)
Strand=Plus/Minus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG----TAAG-GTACTATCAAAT 399
||||||||||||||||||||| || |||||||| ||| ||| | | ||||
Sbjct 1094857 CATGTATTAGCTCTAGAATTATTACAGTTATCCAAATAGGCGAGAAGCCAAAGACCAAAG 1094798
Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459
||| | |||||||||||||| ||||| || ||||||| | || | | || ||||
Sbjct 1094797 TAACCAAAACTGATTTAATGATCCATTTACA-ATTCACTGGACAGGCTCTGTGTAATTAG 1094739
Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGA 494
||||||| || |||||| | ||||||| | ||||
Sbjct 1094738 ACATGCACGGATTAATCCTGGAGACAAAGAGATGA 1094704
>seq98
Length=13236748
Score = 80.6 bits (88), Expect = 8e-13
Identities = 67/82 (82%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156
|||||||||||||||||||| |||||| | ||| |||||| ||||| |||||| |||||
Sbjct 9082636 CCTTCCTTGGATGTGGTAGCTGTTTCTGATGCTTCCTCTCTGGAATAGAACCCCGATTCC 9082695
Query 157 CCGTTACCCGTTGATACCATGG 178
|| | | | || | |||||||
Sbjct 9082696 CCATCAACTGTGGTCACCATGG 9082717
>seq363
Length=1954333
Score = 77.0 bits (84), Expect = 1e-11
Identities = 59/70 (84%), Gaps = 4/70 (6%)
Strand=Plus/Plus
Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460
||| ||||||||||||||||||||||| |||||||||||| | || | | ||||||
Sbjct 59417 AACCATAACTGATTTAATGAGCCATTCACAGTTTCACTGT----ACTGGCTGTGCTTAGA 59472
Query 461 CATGCATGGC 470
||||||||||
Sbjct 59473 CATGCATGGC 59482
>seq63
Length=16905340
Score = 75.2 bits (82), Expect = 3e-11
Identities = 63/75 (84%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489
|||||||||||| | | |||||||||||| ||||||||||||||||||||||||
Sbjct 5021638 AGTTTCACTGTAGCAGCCGTGTGTACTTAGACATGTATGGCTTAATCTTTGAGACAAGCA 5021579
Query 490 TATGACTACT-GGCA 503
|||| ||||| ||||
Sbjct 5021578 TATG-CTACTAGGCA 5021565
>seq1
Length=49259779
Score = 75.2 bits (82), Expect = 3e-11
Identities = 73/94 (78%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192
|||| || ||||||||| ||||||||| |||||| | |||||||||||| ||
Sbjct 14970068 TCTCGGGCATCGAACCCCGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGGCGACT 14970009
Query 193 ACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226
|| | |||||||||||| |||||| || |||||
Sbjct 14970008 ACTACCGAAAGTTGATATGGCAGACGTTCGAATG 14969975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510267568128
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