Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq33 134 6e-30 seq18 98.7 5e-19 >seq33 Length=28693119 Score = 134 bits (148), Expect = 6e-30 Identities = 89/99 (90%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 27964195 GGAAAAGAAACTAACCATGATTCCCTCAGTAAGGGCGAGTGAACAGGGAAGAGCCCAGCG 27964254 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGC 99 |||||||||| ||| |||||||| | ||| |||| || Sbjct 27964255 CCGAATCCCCAGCCCAAGGTGGGGCACAGGAAATGTAGC 27964293 >seq18 Length=50992964 Score = 98.7 bits (108), Expect = 5e-19 Identities = 84/102 (82%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||| ||||||||| |||| ||||| || ||||||| |||||| ||||| | Sbjct 33105056 GGAAAAGAAACTAGCCAGGATTCTCTCAATAACGACGGGTGAACACGGAAGACCCCAGTG 33104997 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 | |||| |||||||| ||||| | |||| ||||||| || Sbjct 33104996 CAGAAT-CCCGCCCCAAGGTGG---GTGGGAAATGTGGCTTA 33104959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230394919680