Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1322 351 2e-94 seq66 277 3e-72 seq26 250 4e-64 seq46 203 6e-50 seq85 197 2e-48 seq15 194 3e-47 seq19 179 6e-43 seq1 158 2e-36 seq70 156 7e-36 seq28 156 7e-36 seq31 105 1e-20 seq168 104 4e-20 seq3 77.0 6e-12 >seq1322 Length=8797 Score = 351 bits (388), Expect = 2e-94 Identities = 255/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 899 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 958 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 959 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 1018 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1019 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 1078 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 1079 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 1138 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 1139 TAAAACCCCAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 1192 >seq66 Length=12789886 Score = 277 bits (306), Expect = 3e-72 Identities = 209/246 (85%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||| | Sbjct 723971 CAGTAGGGTAAAACTAACCTGTTTCACGACGGTCTAATCCCAGCTCATGTTCCCTATTGG 723912 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| Sbjct 723911 TGGGTGAACAATCCAACGCTTGGTGAATTCTACTTCACAATGATAGGAAGAGCCGACATC 723852 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||||||||| | ||| |||||||| |||||| |||||||||||||||||| ||| Sbjct 723851 GAAGGATCAAAAAGCGATGTCACTATGAACACTTGGCCGCCACAAGCCAGTTATCCATGT 723792 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 ||||||||||||| |||||| || | ||| | || | ||||||| ||||| | Sbjct 723791 GGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGATCATGAGGCCCC 723732 Query 275 ACTTTC 280 | |||| Sbjct 723731 ATTTTC 723726 >seq26 Length=35432990 Score = 250 bits (276), Expect = 4e-64 Identities = 180/207 (87%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||| ||| ||||| ||| ||| || ||||||||||||||||| Sbjct 13262709 TCATCAGTAGGGTAAAACTATCCTATCTCACGACCGTCGAATCCCAGCTCACGTTCCCTG 13262650 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||| |||||||||| ||||| ||||| || ||| |||||||||||||||| Sbjct 13262649 TTAGCGGGCGAACAATCCAGTGCTTAGTGAATTATGTTTCACGTTGATAGGAAGAGCCGA 13262590 Query 151 CATCGAAGGATCAAAAAG---CAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 13262589 CATCGAAGGATAAAAAAGCGACAACGTCGCAGTGAACGCTTGGCTGCCACAAGCCAGTTA 13262530 Query 208 TCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||| |||||||||||| ||||||| Sbjct 13262529 TCCCTGCGGTAACTTTTCTCGCACCTC 13262503 >seq46 Length=18364239 Score = 203 bits (224), Expect = 6e-50 Identities = 197/252 (78%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 |||| ||||||| ||||| ||| || || |||||||| | ||||| |||||| |||||| Sbjct 12052031 TAAAGCTAACCTATCTCACAACGTTCGAATCCCAGCTCGCATTCCCCATTAGTAGGTGAA 12051972 Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 |||| ||||||| ||||||| |||| |||| ||||||||| |||| |||||||| Sbjct 12051971 CAATGTAACGCTTGGTGAATTCTACTTCACAATGACAGGAAGAGCTGACACGGAAGGATC 12051912 Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 | ||||||||||| |||||||||||| || |||||||||||||| | ||||||||||| Sbjct 12051911 AGAAAGCAACGTCACTATGAACGCTTAGCCATCACAAGCCAGTTATACTTGTGGTAACTT 12051852 Query 223 TTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGAT-CGATAGGCCACACTTTCA 281 ||||| ||||||| || | ||| || | |||||| | |||||| |||||| Sbjct 12051851 TTCTGACACCTCTTGCTTAAAACCCAGAAAATCAGAAGGATCCTGTAGGCCCTGCTTTCA 12051792 Query 282 TGGTTTGTATTC 293 || ||||||| Sbjct 12051791 CAGTCTGTATTC 12051780 >seq85 Length=6926877 Score = 197 bits (218), Expect = 2e-48 Identities = 127/139 (91%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||| Sbjct 705814 TCATCAGTAGGGTAAAACTAACCTGTCTCACCATGGTCTAAACCCAGCTCATGTTCCCTA 705873 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||| |||| |||||||||||| |||||||||||||| || Sbjct 705874 TTAGTGGGTGAACAATCCAATGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCAGA 705933 Query 151 CATCGAAGGATCAAAAAGC 169 ||||||||||||||||||| Sbjct 705934 CATCGAAGGATCAAAAAGC 705952 >seq15 Length=56459253 Score = 194 bits (214), Expect = 3e-47 Identities = 139/160 (87%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 32160235 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCG 32160294 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGG 253 |||||||||||||||||||||||||||||||||| |||||| || | ||| | | || Sbjct 32160295 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCCAAAGG 32160354 Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | |||||||| ||||| | |||||| ||| ||||||| Sbjct 32160355 TCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 32160394 Score = 86.0 bits (94), Expect = 1e-14 Identities = 135/192 (70%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||| ||| ||||||| ||| | ||| | ||||| |||||||||| |||||| | Sbjct 47515352 CATCAACAGGCTAAAACTGTCCTATTTCACAATCATCTAATCCCAGCTCACATTCCCTGT 47515293 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||| | || |||| ||| ||||||| | | | ||| | | | Sbjct 47515292 TAGTGGGTGAACAACCTAATGCTTGGTGAAGTCTGCTT-----TAAAATGAATGGTCCAA 47515238 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || |||||| |||| | || | |||| || |||||| | || ||| | |||| || Sbjct 47515237 GTCTAAGGATAAAAATGTAATGCTACTAT-AATGCTTGGATATCAAGAGCTAATTATTCC 47515179 Query 212 TGTGGTAACTTT 223 | | |||| ||| Sbjct 47515178 TATCGTAAATTT 47515167 >seq19 Length=50675436 Score = 179 bits (198), Expect = 6e-43 Identities = 162/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||||||||| ||||||| || |||| |||||||||||| | ||||||||||||| Sbjct 42004624 ATTAGTGGGTAAACAATCTAATGCTTGGTGAATTCTGCTTCACAACGATAGGAAGAGCCA 42004565 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 || |||||||||||||||| ||||| || |||| ||||||||||||||||||||||||| Sbjct 42004564 ACGTCGAAGGATCAAAAAGTGACGTCTCTGTGAATGCTTGGCTGCCACAAGCCAGTTATC 42004505 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 || ||||| ||||||||| |||||| | | | | | | || || |||||| | || Sbjct 42004504 CCAGTGGTGACTTTTCTGACACCTCCTGTTTAAGACCTAAAAGGCCTGAAGGATTGTGAG 42004445 Query 270 GCCACACTTTCATGGTTTGTATTC 293 ||| |||||| ||| | ||||| Sbjct 42004444 GCCCTGCTTTCACGGTATATATTC 42004421 >seq1 Length=129759341 Score = 158 bits (174), Expect = 2e-36 Identities = 131/160 (82%), Gaps = 5/160 (3%) Strand=Plus/Plus Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| Sbjct 72558473 TAGGAAGAGCCGACATCGAAGGATCTAAAAGCGACGTCGCTATGAACGCTTGGCCTCCAC 72558532 Query 198 AAGCCAGTTATCCC-----TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG 252 |||||||||||||| ||||||||||||||| |||||| || | ||| | | | Sbjct 72558533 AAGCCAGTTATCCCTGTGGTGTGGTAACTTTTCTTACACCTCCTGCTTAAAACCCCAAAG 72558592 Query 253 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | | |||||||| ||||| | |||||| ||| |||||| Sbjct 72558593 GTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATT 72558632 >seq70 Length=11865675 Score = 156 bits (172), Expect = 7e-36 Identities = 124/149 (83%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 78 CTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA 137 |||| |||||||| ||||||||| | |||| | ||| |||||||||||| |||| Sbjct 9479628 CTCATGTTCCCTACTAGTGGGTGGGCGTTCCACCACTTGGTGAATTCTGCTTCACAATGA 9479569 Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 |||||||||| |||||||||||| |||||||| |||| || |||| ||| || |||| Sbjct 9479568 TAGGAAGAGCTGACATCGAAGGACCAAAAAGCGACGTGGCCGTGAATGCTCAGCCACCAC 9479509 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCT 226 ||||||||||||||||||||||||||||| Sbjct 9479508 AAGCCAGTTATCCCTGTGGTAACTTTTCT 9479480 >seq28 Length=34889373 Score = 156 bits (172), Expect = 7e-36 Identities = 157/203 (77%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||| ||||||||||||||||||| || || | | | |||||||| |||| ||| Sbjct 10802399 TCATCAGTAAAGTAAAACTAACCTGTCTCA-GAAGGCCCAGAACCAGCTCATGTTCTCTA 10802457 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||| | ||||||||| | ||| |||||||||||| | ||||| | | || || Sbjct 10802458 TTAGTGAGAAAACAATCCATTGATTAGTGAATTCTGCTTCATAAGGATAGAAGGCGCTGA 10802517 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| ||||| |||||||| || |||||| |||| || |||| |||| |||||| Sbjct 10802518 CATTGAAGGGCTGAAAAGCAAGATCTCTATGATTGCTTAGCCGCCAAAAGCTGGTTATCA 10802577 Query 211 CTGTGGTAACTTTTCTGGCACCT 233 | |||||||||||||| || || Sbjct 10802578 GTATGGTAACTTTTCTGACATCT 10802600 >seq31 Length=30030426 Score = 105 bits (116), Expect = 1e-20 Identities = 78/91 (86%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 ||||||| ||| ||||| |||||||||||||||| || |||||| | |||||||| Sbjct 20265980 ATAGGAAAAGCGAACATCAAAGGATCAAAAAGCAATGTTATGATGAACACAAGGCTGCCA 20266039 Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCTG 227 |||||||||||||||||||||| |||||||| Sbjct 20266040 CAAGCCAGTTATCCCTGTGGTATCTTTTCTG 20266070 >seq168 Length=969689 Score = 104 bits (114), Expect = 4e-20 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 94 GTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACAT 153 |||||||||||||||||||||| |||||||||||| |||||||||| |||| |||| Sbjct 391114 GTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAAAGCCAACAT 391173 Query 154 CGAAGGATCAAAAAGCAACGTC 175 |||||||||||||||||||| Sbjct 391174 TAAAGGATCAAAAAGCAACGTC 391195 >seq3 Length=107953029 Score = 77.0 bits (84), Expect = 6e-12 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87 |||||||||||||| ||||||||||||| ||| ||||||||||||||| ||||| Sbjct 7278552 ATCAGTAGGGTAAATCTAACCTGTCTCACAACGATCTAAACCCAGCTCATGTTCC 7278606 Score = 77.0 bits (84), Expect = 6e-12 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| |||||||||||| ||||||| | ||| | ||||||| ||||||||| |||||||| Sbjct 21145975 TCACCAGTAGGGTAAAGTTAACCTGGCACATAATGGTCTAATCCCAGCTCATGTTCCCTA 21146034 Query 91 TTAGT 95 ||||| Sbjct 21146035 TTAGT 21146039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854379904512