Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1178 91.5 8e-17 >seq1178 Length=247203 Score = 91.5 bits (100), Expect = 8e-17 Identities = 93/120 (78%), Gaps = 6/120 (5%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAA---AATGATAACATCG 57 |||||||||||||||| |||| | ||| |||| ||| ||| ||| || || || Sbjct 111971 GAACCCAAAGACTTTGGTTTCCTGGAAGCTGCCCGGCGGATCATGGGAATAATGCCACCG 111912 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||| | ||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct 111911 C---ATCGCCAGTCGGCATCGTTTATGGTTGGAACTACGACGGTATCTGATCGTCTTCGA 111855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278341251510