Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09-
20] 22,509 sequences; 4,444,080,527 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq3 127 9e-28
seq744 91.5 7e-17
seq237 87.8 8e-16
seq283 78.8 4e-13
seq953 73.4 2e-11
>seq3
Length=36858092
Score = 127 bits (140), Expect = 9e-28
Identities = 88/100 (88%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 12846193 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGTGAGTGAACAGGGAAGAGCCCAGCA 12846252
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100
|||||||| || | || ||||| | |||| ||||||||
Sbjct 12846253 CCGAATCCTTGCTCTGCATTGGGGTGTGGGAAATGTGGCG 12846292
>seq744
Length=983571
Score = 91.5 bits (100), Expect = 7e-17
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62
|||| ||||| |||||||||||||||||||| | |||||||| ||| |||||||||||||
Sbjct 858376 AAAACAAACTCACCAGGATTCCCTCAGTAACCGGGAGTGAACTGGGGAGAGCCCAGCGCC 858435
Query 63 GAATCCCCGCCCC 75
|||||| | |||
Sbjct 858436 AAATCCCTGTCCC 858448
>seq237
Length=5457736
Score = 87.8 bits (96), Expect = 8e-16
Identities = 84/104 (81%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGAT--TCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58
||||||||||||||||||||| || |||||||| | |||||||||| |||||| |
Sbjct 4166416 GGAAAAGAAACTAACCAGGATTCTCTCTCAGTAAGAGTGAGTGAACAGAGAAGAG-TTGG 4166474
Query 59 CGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||| || |||||| | ||||||||| ||||| ||||||| ||
Sbjct 4166475 TGCC-AACCCCCGCTACACGGTGGGGCACGGGAAATGTGGCCTA 4166517
>seq283
Length=4619534
Score = 78.8 bits (86), Expect = 4e-13
Identities = 61/73 (84%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62
|||| ||||| |||||||||||||||||||| | | ||||| |||||| ||||| ||
Sbjct 129455 AAAACAAACTCACCAGGATTCCCTCAGTAACCGGGTGTGAAGTGGGAAGGACCCAGTGCT 129514
Query 63 GAATCCCCGCCCC 75
|||||||| ||||
Sbjct 129515 GAATCCCCACCCC 129527
>seq953
Length=490111
Score = 73.4 bits (80), Expect = 2e-11
Identities = 60/73 (82%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62
|||| ||||| |||||||||||||||||||| | ||||| |||||| ||||| ||
Sbjct 397545 AAAACAAACTCACCAGGATTCCCTCAGTAACCAGGTGTGAAGTGGGAAGGACCCAGTGCT 397604
Query 63 GAATCCCCGCCCC 75
||||||| |||||
Sbjct 397605 GAATCCCTGCCCC 397617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230351380560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |