Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1178 96.9 4e-18 >seq1178 Length=247203 Score = 96.9 bits (106), Expect = 4e-18 Identities = 133/182 (73%), Gaps = 17/182 (9%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 ||||||||||||||||||||| |||||||||||||| ||| | |||| | | Sbjct 111608 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCAAGCTGCCTGGATACCGCAGCTA 111667 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| ||||||||||||||| ||||| || || | | |||| Sbjct 111668 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTTTCAGAACTG-AGGCCATGA 111725 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCA-ATTGT-----CAAAGGTGAAATTCTTG 183 | || | |||| | | ||| | ||||| ||||| | |||||||||||||| Sbjct 111726 TTAAGAGGGATGGCCAGGG------GCATTCATATTGTGCCACTAGAGGTGAAATTCTTG 111779 Query 184 GA 185 || Sbjct 111780 GA 111781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511888355360