Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09-
20] 22,509 sequences; 4,444,080,527 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq1178 96.9 4e-18
>seq1178
Length=247203
Score = 96.9 bits (106), Expect = 4e-18
Identities = 133/182 (73%), Gaps = 17/182 (9%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| ||| | |||| | |
Sbjct 111608 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCAAGCTGCCTGGATACCGCAGCTA 111667
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| || || | | ||||
Sbjct 111668 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTTTCAGAACTG-AGGCCATGA 111725
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCA-ATTGT-----CAAAGGTGAAATTCTTG 183
| || | |||| | | ||| | ||||| ||||| | ||||||||||||||
Sbjct 111726 TTAAGAGGGATGGCCAGGG------GCATTCATATTGTGCCACTAGAGGTGAAATTCTTG 111779
Query 184 GA 185
||
Sbjct 111780 GA 111781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511888355360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |