Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq61037 179 2e-43 seq54772 179 2e-43 seq41686 179 2e-43 seq41691 71.6 6e-11 >seq61037 Length=1886 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 785 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 844 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 845 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 886 >seq54772 Length=1702 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 428 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 487 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 488 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 529 >seq41686 Length=3562 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 159 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 218 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 219 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 260 >seq41691 Length=4685 Score = 71.6 bits (78), Expect = 6e-11 Identities = 41/42 (98%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 1172 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 1213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230258100960